Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.36■□□□□ 0.37
COMMD3Q9UBI1 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
COMMD3Q9UBI1 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
COMMD3Q9UBI1 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
COMMD3Q9UBI1 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.36■□□□□ 0.37
COMMD3Q9UBI1 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
COMMD3Q9UBI1 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC17.36■□□□□ 0.37
COMMD3Q9UBI1 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.36■□□□□ 0.37
COMMD3Q9UBI1 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
COMMD3Q9UBI1 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
COMMD3Q9UBI1 AL512631.2-201ENST00000604634 923 ntBASIC17.36■□□□□ 0.37
COMMD3Q9UBI1 CROCCP3-202ENST00000420820 1947 ntBASIC17.36■□□□□ 0.37
COMMD3Q9UBI1 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.36■□□□□ 0.37
COMMD3Q9UBI1 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
COMMD3Q9UBI1 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
COMMD3Q9UBI1 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.36■□□□□ 0.37
COMMD3Q9UBI1 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
COMMD3Q9UBI1 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
COMMD3Q9UBI1 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
COMMD3Q9UBI1 BCL2-203ENST00000589955 5011 ntBASIC17.36■□□□□ 0.37
COMMD3Q9UBI1 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
COMMD3Q9UBI1 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COMMD3Q9UBI1 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
COMMD3Q9UBI1 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
COMMD3Q9UBI1 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
COMMD3Q9UBI1 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
COMMD3Q9UBI1 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
COMMD3Q9UBI1 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
COMMD3Q9UBI1 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
COMMD3Q9UBI1 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
COMMD3Q9UBI1 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COMMD3Q9UBI1 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COMMD3Q9UBI1 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
COMMD3Q9UBI1 POU5F1P4-201ENST00000413175 1085 ntBASIC17.35■□□□□ 0.37
COMMD3Q9UBI1 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC17.35■□□□□ 0.37
COMMD3Q9UBI1 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC17.35■□□□□ 0.37
COMMD3Q9UBI1 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.35■□□□□ 0.37
COMMD3Q9UBI1 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COMMD3Q9UBI1 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COMMD3Q9UBI1 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC17.35■□□□□ 0.37
COMMD3Q9UBI1 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
COMMD3Q9UBI1 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.35■□□□□ 0.37
COMMD3Q9UBI1 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
COMMD3Q9UBI1 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.35■□□□□ 0.37
COMMD3Q9UBI1 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.35■□□□□ 0.37
COMMD3Q9UBI1 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
COMMD3Q9UBI1 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
COMMD3Q9UBI1 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
COMMD3Q9UBI1 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
COMMD3Q9UBI1 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
COMMD3Q9UBI1 AC009113.1-201ENST00000570267 2443 ntBASIC17.35■□□□□ 0.37
COMMD3Q9UBI1 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
COMMD3Q9UBI1 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
COMMD3Q9UBI1 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
COMMD3Q9UBI1 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
COMMD3Q9UBI1 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
COMMD3Q9UBI1 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC17.34■□□□□ 0.37
COMMD3Q9UBI1 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.34■□□□□ 0.37
COMMD3Q9UBI1 AL390961.4-201ENST00000623958 2535 ntBASIC17.34■□□□□ 0.37
COMMD3Q9UBI1 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
COMMD3Q9UBI1 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
COMMD3Q9UBI1 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
COMMD3Q9UBI1 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
COMMD3Q9UBI1 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
COMMD3Q9UBI1 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.34■□□□□ 0.37
COMMD3Q9UBI1 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.33■□□□□ 0.37
COMMD3Q9UBI1 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
COMMD3Q9UBI1 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.33■□□□□ 0.37
COMMD3Q9UBI1 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.33■□□□□ 0.37
COMMD3Q9UBI1 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
COMMD3Q9UBI1 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
COMMD3Q9UBI1 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
COMMD3Q9UBI1 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
COMMD3Q9UBI1 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
COMMD3Q9UBI1 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
COMMD3Q9UBI1 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
COMMD3Q9UBI1 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
COMMD3Q9UBI1 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
COMMD3Q9UBI1 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC17.33■□□□□ 0.36
COMMD3Q9UBI1 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
COMMD3Q9UBI1 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
COMMD3Q9UBI1 SF1-220ENST00000626028 704 ntTSL 2 BASIC17.33■□□□□ 0.36
COMMD3Q9UBI1 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
COMMD3Q9UBI1 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
COMMD3Q9UBI1 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
COMMD3Q9UBI1 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
COMMD3Q9UBI1 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
COMMD3Q9UBI1 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
COMMD3Q9UBI1 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
COMMD3Q9UBI1 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
COMMD3Q9UBI1 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
COMMD3Q9UBI1 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
COMMD3Q9UBI1 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.33■□□□□ 0.36
COMMD3Q9UBI1 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
COMMD3Q9UBI1 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
COMMD3Q9UBI1 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC17.33■□□□□ 0.36
COMMD3Q9UBI1 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
COMMD3Q9UBI1 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
COMMD3Q9UBI1 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
COMMD3Q9UBI1 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms