Protein–RNA interactions for Protein: Q9NQT4

EXOSC5, Exosome complex component RRP46, humanhuman

Known RBP eCLIP

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC5Q9NQT4 MED13L-207ENST00000551197 489 ntTSL 54.89□□□□□ -1.631e-6■■■□□ 15
EXOSC5Q9NQT4 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.18■□□□□ 0.181e-6■■■□□ 15
EXOSC5Q9NQT4 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC13.57□□□□□ -0.241e-6■■■□□ 15
EXOSC5Q9NQT4 FARP1-201ENST00000319562 10262 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.591e-6■■■□□ 15
EXOSC5Q9NQT4 FARP1-219ENST00000596580 13532 ntTSL 5 BASIC7.35□□□□□ -1.231e-6■■■□□ 15
EXOSC5Q9NQT4 SRPK2-211ENST00000482862 329 ntTSL 517.36■□□□□ 0.371e-6■■■□□ 14.9
EXOSC5Q9NQT4 SRPK2-212ENST00000482897 715 ntTSL 516.71■□□□□ 0.271e-6■■■□□ 14.9
EXOSC5Q9NQT4 SRPK2-206ENST00000465112 568 ntTSL 311.31□□□□□ -0.61e-6■■■□□ 14.9
EXOSC5Q9NQT4 SRPK2-203ENST00000460391 666 ntTSL 210.76□□□□□ -0.691e-6■■■□□ 14.9
EXOSC5Q9NQT4 SRPK2-204ENST00000462282 505 ntTSL 39.71□□□□□ -0.861e-6■■■□□ 14.9
EXOSC5Q9NQT4 SRPK2-202ENST00000393651 3650 ntAPPRIS ALT2 TSL 2 BASIC8.45□□□□□ -1.061e-6■■■□□ 14.9
EXOSC5Q9NQT4 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.321e-6■■■□□ 14.9
EXOSC5Q9NQT4 JAK2-204ENST00000636127 2615 ntTSL 512.81□□□□□ -0.361e-6■■■□□ 14.9
EXOSC5Q9NQT4 JAK2-202ENST00000476574 327 ntTSL 39.24□□□□□ -0.931e-6■■■□□ 14.9
EXOSC5Q9NQT4 ARF1-209ENST00000478424 1059 ntTSL 219.49■□□□□ 0.717e-7■■■□□ 14.9
EXOSC5Q9NQT4 ARF1-208ENST00000478336 930 ntTSL 219.22■□□□□ 0.677e-7■■■□□ 14.9
EXOSC5Q9NQT4 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.637e-7■■■□□ 14.9
EXOSC5Q9NQT4 ARF1-206ENST00000473949 578 ntTSL 516.35■□□□□ 0.217e-7■■■□□ 14.9
EXOSC5Q9NQT4 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.027e-7■■■□□ 14.9
EXOSC5Q9NQT4 ARF1-207ENST00000477451 789 ntTSL 514.5□□□□□ -0.097e-7■■■□□ 14.9
EXOSC5Q9NQT4 ARF1-203ENST00000470558 820 ntTSL 212.57□□□□□ -0.47e-7■■■□□ 14.9
EXOSC5Q9NQT4 ARF1-202ENST00000469235 678 ntTSL 312.37□□□□□ -0.437e-7■■■□□ 14.9
EXOSC5Q9NQT4 ARF1-210ENST00000482962 597 ntTSL 312.09□□□□□ -0.477e-7■■■□□ 14.9
EXOSC5Q9NQT4 ARF1-204ENST00000470670 712 ntTSL 311.54□□□□□ -0.567e-7■■■□□ 14.9
EXOSC5Q9NQT4 ARF1-205ENST00000473546 291 ntTSL 210.34□□□□□ -0.757e-7■■■□□ 14.9
EXOSC5Q9NQT4 ARF1-201ENST00000272102 1888 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.927e-7■■■□□ 14.9
EXOSC5Q9NQT4 ZNF638-225ENST00000494241 703 ntTSL 33.44□□□□□ -1.864e-7■■■□□ 14.9
EXOSC5Q9NQT4 ZNF638-219ENST00000487638 4233 ntTSL 1 (best)1.93□□□□□ -2.14e-7■■■□□ 14.9
EXOSC5Q9NQT4 ZNF638-202ENST00000409407 4470 ntTSL 21.79□□□□□ -2.124e-7■■■□□ 14.9
EXOSC5Q9NQT4 STK24-203ENST00000397517 4578 ntTSL 2 BASIC14.78□□□□□ -0.041e-6■■■□□ 14.9
EXOSC5Q9NQT4 STK24-205ENST00000444574 1590 ntTSL 1 (best)12.27□□□□□ -0.441e-6■■■□□ 14.9
EXOSC5Q9NQT4 STK24-207ENST00000491878 547 ntTSL 411.98□□□□□ -0.491e-6■■■□□ 14.9
EXOSC5Q9NQT4 STK24-201ENST00000376547 2492 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.591e-6■■■□□ 14.9
EXOSC5Q9NQT4 STK24-208ENST00000539966 9361 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.761e-6■■■□□ 14.9
EXOSC5Q9NQT4 TNKS-205ENST00000518027 766 ntTSL 36.42□□□□□ -1.381e-7■■■□□ 14.8
EXOSC5Q9NQT4 PHF21A-211ENST00000529734 557 ntTSL 411.11□□□□□ -0.633e-6■■■□□ 14.8
EXOSC5Q9NQT4 PHF21A-202ENST00000418153 2730 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.773e-6■■■□□ 14.8
EXOSC5Q9NQT4 PHF21A-201ENST00000323180 3675 ntTSL 1 (best) BASIC7.51□□□□□ -1.213e-6■■■□□ 14.8
EXOSC5Q9NQT4 PHF21A-218ENST00000532883 1051 ntTSL 56.56□□□□□ -1.363e-6■■■□□ 14.8
EXOSC5Q9NQT4 PHF21A-203ENST00000524497 555 ntTSL 52.96□□□□□ -1.943e-6■■■□□ 14.8
EXOSC5Q9NQT4 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.714e-6■■■□□ 14.8
EXOSC5Q9NQT4 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.02■□□□□ 0.954e-7■■■□□ 14.8
EXOSC5Q9NQT4 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.94e-7■■■□□ 14.8
EXOSC5Q9NQT4 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC14.6□□□□□ -0.074e-7■■■□□ 14.8
EXOSC5Q9NQT4 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.084e-7■■■□□ 14.8
EXOSC5Q9NQT4 PICALM-201ENST00000356360 1958 ntTSL 5 BASIC6.4□□□□□ -1.384e-7■■■□□ 14.8
EXOSC5Q9NQT4 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.11□□□□□ -1.914e-7■■■□□ 14.8
EXOSC5Q9NQT4 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.456e-7■■■□□ 14.8
EXOSC5Q9NQT4 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC16.87■□□□□ 0.296e-7■■■□□ 14.8
EXOSC5Q9NQT4 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.196e-7■■■□□ 14.8
EXOSC5Q9NQT4 MED26-204ENST00000598608 742 ntTSL 315.68■□□□□ 0.16e-7■■■□□ 14.8
EXOSC5Q9NQT4 GPATCH2L-205ENST00000554375 1791 ntTSL 515.56■□□□□ 0.086e-7■■■□□ 14.8
EXOSC5Q9NQT4 MED26-205ENST00000600060 478 ntTSL 215.18■□□□□ 0.026e-7■■■□□ 14.8
EXOSC5Q9NQT4 NSUN2-203ENST00000504374 3217 ntTSL 215.07■□□□□ 06e-7■■■□□ 14.8
EXOSC5Q9NQT4 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.116e-7■■■□□ 14.8
EXOSC5Q9NQT4 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.186e-7■■■□□ 14.8
EXOSC5Q9NQT4 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.426e-7■■■□□ 14.8
EXOSC5Q9NQT4 STK26-204ENST00000481105 1835 ntTSL 2 BASIC12□□□□□ -0.496e-7■■■□□ 14.8
EXOSC5Q9NQT4 GPATCH2L-202ENST00000312858 2438 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.556e-7■■■□□ 14.8
EXOSC5Q9NQT4 ARF1-211ENST00000490705 881 ntTSL 310.59□□□□□ -0.716e-7■■■□□ 14.8
EXOSC5Q9NQT4 STK26-203ENST00000394335 3017 ntTSL 2 BASIC10.44□□□□□ -0.746e-7■■■□□ 14.8
EXOSC5Q9NQT4 AC008764.4-207ENST00000600705 956 ntTSL 2 BASIC10.17□□□□□ -0.786e-7■■■□□ 14.8
EXOSC5Q9NQT4 STK26-201ENST00000354719 3179 ntTSL 2 BASIC9.77□□□□□ -0.856e-7■■■□□ 14.8
EXOSC5Q9NQT4 AC245297.1-201ENST00000313342 933 ntBASIC9.54□□□□□ -0.886e-7■■■□□ 14.8
EXOSC5Q9NQT4 GPATCH2L-210ENST00000556675 771 ntTSL 38.56□□□□□ -1.046e-7■■■□□ 14.8
EXOSC5Q9NQT4 AC008764.4-204ENST00000595505 400 ntTSL 28.4□□□□□ -1.066e-7■■■□□ 14.8
EXOSC5Q9NQT4 AC008764.4-206ENST00000594509 479 ntTSL 28.07□□□□□ -1.126e-7■■■□□ 14.8
EXOSC5Q9NQT4 GPATCH2L-206ENST00000554799 821 ntTSL 57.42□□□□□ -1.226e-7■■■□□ 14.8
EXOSC5Q9NQT4 MED26-206ENST00000601478 558 ntTSL 47.36□□□□□ -1.236e-7■■■□□ 14.8
EXOSC5Q9NQT4 NSUN2-205ENST00000505892 3558 ntTSL 1 (best)7.17□□□□□ -1.266e-7■■■□□ 14.8
EXOSC5Q9NQT4 AC008764.4-201ENST00000593962 468 ntTSL 27.03□□□□□ -1.286e-7■■■□□ 14.8
EXOSC5Q9NQT4 AC008764.4-202ENST00000601636 437 ntTSL 36.43□□□□□ -1.386e-7■■■□□ 14.8
EXOSC5Q9NQT4 AC008764.4-205ENST00000593459 222 ntAPPRIS P1 TSL 36.33□□□□□ -1.46e-7■■■□□ 14.8
EXOSC5Q9NQT4 AC008764.4-203ENST00000593991 548 ntTSL 26.18□□□□□ -1.426e-7■■■□□ 14.8
EXOSC5Q9NQT4 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC5.9□□□□□ -1.476e-7■■■□□ 14.8
EXOSC5Q9NQT4 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.64□□□□□ -1.676e-7■■■□□ 14.8
EXOSC5Q9NQT4 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC4.61□□□□□ -1.676e-7■■■□□ 14.8
EXOSC5Q9NQT4 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.686e-7■■■□□ 14.8
EXOSC5Q9NQT4 PPP2R2A-221ENST00000523964 567 ntTSL 43.19□□□□□ -1.96e-7■■■□□ 14.8
EXOSC5Q9NQT4 TJP1-206ENST00000473741 270 ntTSL 21.48□□□□□ -2.176e-7■■■□□ 14.8
EXOSC5Q9NQT4 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC17.19■□□□□ 0.346e-7■■■□□ 14.8
EXOSC5Q9NQT4 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.16□□□□□ -1.96e-7■■■□□ 14.8
EXOSC5Q9NQT4 FBXO18-208ENST00000470089 979 ntTSL 523.09■■□□□ 1.291e-6■■■□□ 14.8
EXOSC5Q9NQT4 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC15.02■□□□□ -01e-6■■■□□ 14.8
EXOSC5Q9NQT4 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.021e-6■■■□□ 14.8
EXOSC5Q9NQT4 FBXO18-206ENST00000462507 906 ntTSL 210.1□□□□□ -0.791e-6■■■□□ 14.8
EXOSC5Q9NQT4 USP42-202ENST00000404008 1380 ntTSL 224.04■■□□□ 1.446e-7■■■□□ 14.8
EXOSC5Q9NQT4 USP42-205ENST00000465073 1490 ntTSL 518.03■□□□□ 0.486e-7■■■□□ 14.8
EXOSC5Q9NQT4 USP42-207ENST00000521713 5017 ntTSL 514.68□□□□□ -0.066e-7■■■□□ 14.8
EXOSC5Q9NQT4 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.086e-7■■■□□ 14.8
EXOSC5Q9NQT4 USP42-206ENST00000479544 4286 ntTSL 1 (best)12.31□□□□□ -0.446e-7■■■□□ 14.8
EXOSC5Q9NQT4 USP42-203ENST00000426246 3611 ntTSL 211.82□□□□□ -0.526e-7■■■□□ 14.8
EXOSC5Q9NQT4 FER-205ENST00000505323 806 ntTSL 36.95□□□□□ -1.36e-7■■■□□ 14.8
EXOSC5Q9NQT4 FER-209ENST00000618353 1420 ntTSL 1 (best) BASIC6.38□□□□□ -1.396e-7■■■□□ 14.8
EXOSC5Q9NQT4 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.26□□□□□ -1.736e-7■■■□□ 14.8
EXOSC5Q9NQT4 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC20.85■□□□□ 0.933e-6■■■□□ 14.7
EXOSC5Q9NQT4 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.663e-6■■■□□ 14.7
EXOSC5Q9NQT4 LYPLA1-210ENST00000521352 580 ntTSL 514.96□□□□□ -0.013e-6■■■□□ 14.7
EXOSC5Q9NQT4 LYPLA1-209ENST00000520896 578 ntTSL 414.82□□□□□ -0.043e-6■■■□□ 14.7
EXOSC5Q9NQT4 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC13.78□□□□□ -0.23e-6■■■□□ 14.7
Retrieved 100 of 8,799 protein–RNA pairs in 49.2 ms