Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 PCSK6-202ENST00000398185 3723 ntTSL 1 (best)10.12□□□□□ -0.791e-6■■■■□ 21.7
XRN2Q9H0D6 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.082e-6■■■■□ 21.7
XRN2Q9H0D6 LRP5-206ENST00000529993 5103 ntTSL 1 (best)14.99□□□□□ -0.019e-7■■■■□ 21.7
XRN2Q9H0D6 GAPDH-211ENST00000619601 1086 ntTSL 5 BASIC13.04□□□□□ -0.322e-6■■■■□ 21.7
XRN2Q9H0D6 YWHAZ-215ENST00000518736 883 ntTSL 322.52■■□□□ 1.25e-7■■■■□ 21.7
XRN2Q9H0D6 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.025e-7■■■■□ 21.7
XRN2Q9H0D6 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.935e-7■■■■□ 21.7
XRN2Q9H0D6 RSL24D1-204ENST00000564344 269 ntTSL 513.84□□□□□ -0.194e-8■■■■□ 21.7
XRN2Q9H0D6 RSL24D1-201ENST00000260443 2015 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.924e-8■■■■□ 21.7
XRN2Q9H0D6 RSL24D1-203ENST00000562993 940 ntTSL 36.29□□□□□ -1.44e-8■■■■□ 21.7
XRN2Q9H0D6 AKAP1-206ENST00000571629 3105 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.541e-6■■■■□ 21.7
XRN2Q9H0D6 AKAP1-219ENST00000621116 4285 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.681e-6■■■■□ 21.7
XRN2Q9H0D6 IGF2BP2-208ENST00000466476 469 ntTSL 214.89□□□□□ -0.036e-7■■■■□ 21.7
XRN2Q9H0D6 EIF4A1-219ENST00000581770 447 ntTSL 217.11■□□□□ 0.332e-9■■■■□ 21.7
XRN2Q9H0D6 EIF4A1-205ENST00000577738 531 ntTSL 214.74□□□□□ -0.052e-9■■■■□ 21.7
XRN2Q9H0D6 IPO4-211ENST00000560155 3485 ntTSL 1 (best)12.27□□□□□ -0.451e-6■■■■□ 21.7
XRN2Q9H0D6 IPO4-218ENST00000561199 3249 ntTSL 211.91□□□□□ -0.51e-6■■■■□ 21.7
XRN2Q9H0D6 IPO4-207ENST00000558780 3540 ntTSL 211.77□□□□□ -0.531e-6■■■■□ 21.7
XRN2Q9H0D6 IPO4-203ENST00000558046 3440 ntTSL 211.59□□□□□ -0.551e-6■■■■□ 21.7
XRN2Q9H0D6 IPO4-214ENST00000560798 3581 ntTSL 211.48□□□□□ -0.571e-6■■■■□ 21.7
XRN2Q9H0D6 IPO4-217ENST00000561090 3632 ntTSL 211.25□□□□□ -0.611e-6■■■■□ 21.7
XRN2Q9H0D6 AL136295.4-201ENST00000561419 4351 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.611e-6■■■■□ 21.7
XRN2Q9H0D6 IPO4-201ENST00000354464 3646 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.781e-6■■■■□ 21.7
XRN2Q9H0D6 IPO4-209ENST00000559588 3537 ntTSL 1 (best)10.07□□□□□ -0.81e-6■■■■□ 21.7
XRN2Q9H0D6 LAMA5-213ENST00000497053 723 ntTSL 316.83■□□□□ 0.286e-9■■■■□ 21.7
XRN2Q9H0D6 SQSTM1-215ENST00000514093 842 ntTSL 525.36■■□□□ 1.659e-7■■■■□ 21.6
XRN2Q9H0D6 SQSTM1-204ENST00000453046 572 ntTSL 421.52■■□□□ 1.045e-9■■■■□ 21.6
XRN2Q9H0D6 SQSTM1-209ENST00000504627 602 ntTSL 521.52■■□□□ 1.045e-9■■■■□ 21.6
XRN2Q9H0D6 SQSTM1-212ENST00000508284 578 ntTSL 421.52■■□□□ 1.045e-9■■■■□ 21.6
XRN2Q9H0D6 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.378e-8■■■■□ 21.6
XRN2Q9H0D6 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC17.2■□□□□ 0.348e-8■■■■□ 21.6
XRN2Q9H0D6 SQSTM1-205ENST00000464493 532 ntTSL 416.79■□□□□ 0.285e-9■■■■□ 21.6
XRN2Q9H0D6 SQSTM1-207ENST00000481335 562 ntTSL 414.61□□□□□ -0.075e-9■■■■□ 21.6
XRN2Q9H0D6 SQSTM1-203ENST00000422245 628 ntTSL 413.97□□□□□ -0.175e-9■■■■□ 21.6
XRN2Q9H0D6 GPX4-205ENST00000587932 274 ntTSL 233.48■■■□□ 2.956e-7■■■■□ 21.6
XRN2Q9H0D6 CHFR-218ENST00000540963 875 ntTSL 233.12■■■□□ 2.893e-7■■■■□ 21.6
XRN2Q9H0D6 UBA2-210ENST00000607361 754 ntTSL 231.37■■■□□ 2.616e-7■■■■□ 21.6
XRN2Q9H0D6 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.566e-7■■■■□ 21.6
XRN2Q9H0D6 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC30.59■■■□□ 2.496e-7■■■■□ 21.6
XRN2Q9H0D6 SURF1-203ENST00000463965 493 ntTSL 330.46■■■□□ 2.471e-12■■■■□ 21.6
XRN2Q9H0D6 EHMT2-208ENST00000465429 1454 ntTSL 229.66■■■□□ 2.348e-10■■■■□ 21.6
XRN2Q9H0D6 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC29.63■■■□□ 2.331e-12■■■■□ 21.6
XRN2Q9H0D6 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.331e-12■■■■□ 21.6
XRN2Q9H0D6 NR2F6-202ENST00000596878 731 ntTSL 329.31■■■□□ 2.286e-7■■■■□ 21.6
XRN2Q9H0D6 MOB2-207ENST00000614710 705 ntTSL 5 BASIC28.85■■■□□ 2.216e-7■■■■□ 21.6
XRN2Q9H0D6 PRR5-204ENST00000403696 789 ntTSL 328.82■■■□□ 2.26e-7■■■■□ 21.6
XRN2Q9H0D6 GALE-212ENST00000470383 2073 ntTSL 228.29■■■□□ 2.128e-10■■■■□ 21.6
XRN2Q9H0D6 LRRFIP1-205ENST00000420665 570 ntTSL 328.12■■■□□ 2.096e-7■■■■□ 21.6
XRN2Q9H0D6 UTP4-211ENST00000567460 595 ntTSL 427.95■■■□□ 2.066e-7■■■■□ 21.6
XRN2Q9H0D6 ASPHD1-202ENST00000414952 1451 ntTSL 227.44■■□□□ 1.986e-7■■■■□ 21.6
XRN2Q9H0D6 ASPHD1-205ENST00000566693 1732 ntTSL 1 (best)27.02■■□□□ 1.926e-7■■■■□ 21.6
XRN2Q9H0D6 PEX10-203ENST00000502666 653 ntTSL 326.97■■□□□ 1.916e-7■■■■□ 21.6
XRN2Q9H0D6 PEX10-205ENST00000508384 611 ntTSL 326.97■■□□□ 1.916e-7■■■■□ 21.6
XRN2Q9H0D6 UBA2-203ENST00000586313 1458 ntTSL 226.79■■□□□ 1.886e-7■■■■□ 21.6
XRN2Q9H0D6 PEX10-207ENST00000514502 548 ntTSL 426.66■■□□□ 1.866e-7■■■■□ 21.6
XRN2Q9H0D6 PEX10-206ENST00000510434 907 ntTSL 326.5■■□□□ 1.836e-7■■■■□ 21.6
XRN2Q9H0D6 GPX4-208ENST00000592940 1184 ntTSL 526.28■■□□□ 1.86e-7■■■■□ 21.6
XRN2Q9H0D6 AMDHD2-212ENST00000566706 940 ntTSL 526.19■■□□□ 1.786e-7■■■■□ 21.6
XRN2Q9H0D6 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC25.9■■□□□ 1.746e-7■■■■□ 21.6
XRN2Q9H0D6 CLMN-205ENST00000556416 1772 ntTSL 225.87■■□□□ 1.738e-10■■■■□ 21.6
XRN2Q9H0D6 MEF2A-211ENST00000559903 574 ntTSL 325.85■■□□□ 1.736e-7■■■■□ 21.6
XRN2Q9H0D6 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC25.62■■□□□ 1.695e-6■■■■□ 21.6
XRN2Q9H0D6 PPT2-EGFL8-207ENST00000585246 1051 ntAPPRIS ALT2 TSL 225.45■■□□□ 1.666e-7■■■■□ 21.6
XRN2Q9H0D6 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.636e-7■■■■□ 21.6
XRN2Q9H0D6 PTDSS2-203ENST00000525727 837 ntTSL 1 (best)25.17■■□□□ 1.626e-7■■■■□ 21.6
XRN2Q9H0D6 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC24.87■■□□□ 1.576e-7■■■■□ 21.6
XRN2Q9H0D6 PTDSS2-207ENST00000527479 520 ntTSL 524.79■■□□□ 1.566e-7■■■■□ 21.6
XRN2Q9H0D6 AMDHD2-211ENST00000565963 844 ntTSL 524.58■■□□□ 1.536e-7■■■■□ 21.6
XRN2Q9H0D6 NCOA2-205ENST00000520416 526 ntTSL 324.46■■□□□ 1.516e-7■■■■□ 21.6
XRN2Q9H0D6 TRABD-206ENST00000472677 1661 ntTSL 1 (best)24.24■■□□□ 1.471e-12■■■■□ 21.6
XRN2Q9H0D6 GALE-209ENST00000467070 556 ntTSL 324.15■■□□□ 1.468e-10■■■■□ 21.6
XRN2Q9H0D6 GALE-208ENST00000466250 598 ntTSL 223.86■■□□□ 1.418e-10■■■■□ 21.6
XRN2Q9H0D6 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.416e-7■■■■□ 21.6
XRN2Q9H0D6 AMDHD2-217ENST00000569879 924 ntTSL 323.82■■□□□ 1.46e-7■■■■□ 21.6
XRN2Q9H0D6 GPR108-211ENST00000597706 1834 ntTSL 523.77■■□□□ 1.46e-7■■■■□ 21.6
XRN2Q9H0D6 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.386e-7■■■■□ 21.6
XRN2Q9H0D6 ASPHD1-204ENST00000563177 775 ntAPPRIS ALT2 TSL 523.67■■□□□ 1.386e-7■■■■□ 21.6
XRN2Q9H0D6 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC23.66■■□□□ 1.386e-7■■■■□ 21.6
XRN2Q9H0D6 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC23.53■■□□□ 1.366e-7■■■■□ 21.6
XRN2Q9H0D6 ATF1-202ENST00000549612 568 ntTSL 523.43■■□□□ 1.346e-7■■■■□ 21.6
XRN2Q9H0D6 AMDHD2-209ENST00000563633 1117 ntTSL 523.28■■□□□ 1.326e-7■■■■□ 21.6
XRN2Q9H0D6 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.296e-7■■■■□ 21.6
XRN2Q9H0D6 SURF1-202ENST00000437995 813 ntTSL 522.95■■□□□ 1.261e-12■■■■□ 21.6
XRN2Q9H0D6 MOB2-203ENST00000526698 608 ntTSL 322.9■■□□□ 1.266e-7■■■■□ 21.6
XRN2Q9H0D6 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC22.81■■□□□ 1.246e-7■■■■□ 21.6
XRN2Q9H0D6 AC009041.2-208ENST00000563837 705 ntTSL 222.8■■□□□ 1.241e-12■■■■□ 21.6
XRN2Q9H0D6 AL121906.2-201ENST00000621597 723 ntBASIC22.74■■□□□ 1.236e-7■■■■□ 21.6
XRN2Q9H0D6 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC22.72■■□□□ 1.236e-7■■■■□ 21.6
XRN2Q9H0D6 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.26e-7■■■■□ 21.6
XRN2Q9H0D6 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC22.54■■□□□ 1.26e-7■■■■□ 21.6
XRN2Q9H0D6 CFL1-205ENST00000526975 567 ntTSL 322.53■■□□□ 1.23e-7■■■■□ 21.6
XRN2Q9H0D6 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.26e-7■■■■□ 21.6
XRN2Q9H0D6 AC009041.2-207ENST00000565069 813 ntTSL 322.49■■□□□ 1.191e-12■■■■□ 21.6
XRN2Q9H0D6 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.196e-7■■■■□ 21.6
XRN2Q9H0D6 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.171e-12■■■■□ 21.6
XRN2Q9H0D6 SLC20A2-209ENST00000521455 411 ntTSL 322.33■■□□□ 1.178e-10■■■■□ 21.6
XRN2Q9H0D6 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.166e-7■■■■□ 21.6
XRN2Q9H0D6 ST3GAL4-214ENST00000531217 1745 ntTSL 522.28■■□□□ 1.165e-6■■■■□ 21.6
XRN2Q9H0D6 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC22.24■■□□□ 1.158e-10■■■■□ 21.6
XRN2Q9H0D6 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.156e-7■■■■□ 21.6
Retrieved 100 of 21,068 protein–RNA pairs in 131.4 ms