Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC15.99■□□□□ 0.15
NKX6-2Q9C056 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NKX6-2Q9C056 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC15.98■□□□□ 0.15
NKX6-2Q9C056 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC15.98■□□□□ 0.15
NKX6-2Q9C056 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC15.98■□□□□ 0.15
NKX6-2Q9C056 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NKX6-2Q9C056 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NKX6-2Q9C056 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC15.98■□□□□ 0.15
NKX6-2Q9C056 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NKX6-2Q9C056 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NKX6-2Q9C056 TREX1-205ENST00000625293 1783 ntBASIC15.98■□□□□ 0.15
NKX6-2Q9C056 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
NKX6-2Q9C056 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NKX6-2Q9C056 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NKX6-2Q9C056 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC15.98■□□□□ 0.15
NKX6-2Q9C056 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
NKX6-2Q9C056 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC15.98■□□□□ 0.15
NKX6-2Q9C056 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC15.98■□□□□ 0.15
NKX6-2Q9C056 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
NKX6-2Q9C056 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC15.98■□□□□ 0.15
NKX6-2Q9C056 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC15.98■□□□□ 0.15
NKX6-2Q9C056 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC15.97■□□□□ 0.15
NKX6-2Q9C056 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NKX6-2Q9C056 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
NKX6-2Q9C056 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
NKX6-2Q9C056 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
NKX6-2Q9C056 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC15.97■□□□□ 0.15
NKX6-2Q9C056 AL354751.1-201ENST00000412768 1863 ntBASIC15.97■□□□□ 0.15
NKX6-2Q9C056 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC15.97■□□□□ 0.15
NKX6-2Q9C056 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC15.97■□□□□ 0.15
NKX6-2Q9C056 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NKX6-2Q9C056 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC15.97■□□□□ 0.15
NKX6-2Q9C056 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC15.97■□□□□ 0.15
NKX6-2Q9C056 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NKX6-2Q9C056 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
NKX6-2Q9C056 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC15.97■□□□□ 0.15
NKX6-2Q9C056 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
NKX6-2Q9C056 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
NKX6-2Q9C056 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
NKX6-2Q9C056 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NKX6-2Q9C056 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
NKX6-2Q9C056 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
NKX6-2Q9C056 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
NKX6-2Q9C056 AP006587.3-201ENST00000525742 1516 ntBASIC15.97■□□□□ 0.15
NKX6-2Q9C056 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
NKX6-2Q9C056 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NKX6-2Q9C056 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
NKX6-2Q9C056 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NKX6-2Q9C056 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC15.97■□□□□ 0.15
NKX6-2Q9C056 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
NKX6-2Q9C056 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC15.97■□□□□ 0.15
NKX6-2Q9C056 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
NKX6-2Q9C056 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NKX6-2Q9C056 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
NKX6-2Q9C056 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
NKX6-2Q9C056 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
NKX6-2Q9C056 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.15
NKX6-2Q9C056 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
NKX6-2Q9C056 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
NKX6-2Q9C056 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
NKX6-2Q9C056 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
NKX6-2Q9C056 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NKX6-2Q9C056 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NKX6-2Q9C056 MKRN4P-201ENST00000444706 1521 ntBASIC15.96■□□□□ 0.15
NKX6-2Q9C056 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
NKX6-2Q9C056 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
NKX6-2Q9C056 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NKX6-2Q9C056 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC15.96■□□□□ 0.15
NKX6-2Q9C056 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC15.96■□□□□ 0.15
NKX6-2Q9C056 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
NKX6-2Q9C056 AC090164.3-201ENST00000610780 2143 ntBASIC15.96■□□□□ 0.15
NKX6-2Q9C056 BRD4-212ENST00000630599 726 ntTSL 2 BASIC15.96■□□□□ 0.15
NKX6-2Q9C056 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NKX6-2Q9C056 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC15.96■□□□□ 0.15
NKX6-2Q9C056 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
NKX6-2Q9C056 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
NKX6-2Q9C056 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
NKX6-2Q9C056 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NKX6-2Q9C056 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC15.96■□□□□ 0.15
NKX6-2Q9C056 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
NKX6-2Q9C056 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC15.96■□□□□ 0.15
NKX6-2Q9C056 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC15.96■□□□□ 0.14
NKX6-2Q9C056 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
NKX6-2Q9C056 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.14
NKX6-2Q9C056 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
NKX6-2Q9C056 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
NKX6-2Q9C056 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
NKX6-2Q9C056 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC15.95■□□□□ 0.14
NKX6-2Q9C056 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC15.95■□□□□ 0.14
NKX6-2Q9C056 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
NKX6-2Q9C056 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
NKX6-2Q9C056 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NKX6-2Q9C056 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC15.95■□□□□ 0.14
NKX6-2Q9C056 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NKX6-2Q9C056 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NKX6-2Q9C056 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NKX6-2Q9C056 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NKX6-2Q9C056 FST-202ENST00000396947 2538 ntTSL 5 BASIC15.95■□□□□ 0.14
NKX6-2Q9C056 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NKX6-2Q9C056 TMEM179-206ENST00000616017 1645 ntBASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms