Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.49■□□□□ 0.71
RFWD2Q8NHY2 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RFWD2Q8NHY2 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RFWD2Q8NHY2 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RFWD2Q8NHY2 CROCCP3-202ENST00000420820 1947 ntBASIC19.49■□□□□ 0.71
RFWD2Q8NHY2 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RFWD2Q8NHY2 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RFWD2Q8NHY2 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.49■□□□□ 0.71
RFWD2Q8NHY2 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.48■□□□□ 0.71
RFWD2Q8NHY2 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RFWD2Q8NHY2 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.48■□□□□ 0.71
RFWD2Q8NHY2 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RFWD2Q8NHY2 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RFWD2Q8NHY2 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.48■□□□□ 0.71
RFWD2Q8NHY2 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RFWD2Q8NHY2 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.48■□□□□ 0.71
RFWD2Q8NHY2 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
RFWD2Q8NHY2 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RFWD2Q8NHY2 ZNRF2P3-201ENST00000424200 374 ntBASIC19.48■□□□□ 0.71
RFWD2Q8NHY2 AC007322.3-201ENST00000426526 701 ntBASIC19.48■□□□□ 0.71
RFWD2Q8NHY2 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RFWD2Q8NHY2 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.48■□□□□ 0.71
RFWD2Q8NHY2 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RFWD2Q8NHY2 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.48■□□□□ 0.71
RFWD2Q8NHY2 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.48■□□□□ 0.71
RFWD2Q8NHY2 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
RFWD2Q8NHY2 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RFWD2Q8NHY2 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RFWD2Q8NHY2 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
RFWD2Q8NHY2 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
RFWD2Q8NHY2 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RFWD2Q8NHY2 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.47■□□□□ 0.71
RFWD2Q8NHY2 AC005332.8-201ENST00000622750 2735 ntBASIC19.47■□□□□ 0.71
RFWD2Q8NHY2 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RFWD2Q8NHY2 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RFWD2Q8NHY2 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.47■□□□□ 0.71
RFWD2Q8NHY2 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.47■□□□□ 0.71
RFWD2Q8NHY2 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RFWD2Q8NHY2 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RFWD2Q8NHY2 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
RFWD2Q8NHY2 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
RFWD2Q8NHY2 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RFWD2Q8NHY2 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.47■□□□□ 0.71
RFWD2Q8NHY2 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RFWD2Q8NHY2 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
RFWD2Q8NHY2 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.47■□□□□ 0.71
RFWD2Q8NHY2 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RFWD2Q8NHY2 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.47■□□□□ 0.71
RFWD2Q8NHY2 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.47■□□□□ 0.71
RFWD2Q8NHY2 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.47■□□□□ 0.71
RFWD2Q8NHY2 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
RFWD2Q8NHY2 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
RFWD2Q8NHY2 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RFWD2Q8NHY2 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.47■□□□□ 0.71
RFWD2Q8NHY2 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.47■□□□□ 0.71
RFWD2Q8NHY2 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RFWD2Q8NHY2 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RFWD2Q8NHY2 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
RFWD2Q8NHY2 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RFWD2Q8NHY2 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RFWD2Q8NHY2 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
RFWD2Q8NHY2 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
RFWD2Q8NHY2 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RFWD2Q8NHY2 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
RFWD2Q8NHY2 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
RFWD2Q8NHY2 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
RFWD2Q8NHY2 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.46■□□□□ 0.71
RFWD2Q8NHY2 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RFWD2Q8NHY2 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
RFWD2Q8NHY2 FAM21FP-204ENST00000608637 956 ntBASIC19.46■□□□□ 0.71
RFWD2Q8NHY2 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.46■□□□□ 0.71
RFWD2Q8NHY2 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RFWD2Q8NHY2 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
RFWD2Q8NHY2 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
RFWD2Q8NHY2 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RFWD2Q8NHY2 AC104581.1-202ENST00000635932 2618 ntBASIC19.46■□□□□ 0.71
RFWD2Q8NHY2 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RFWD2Q8NHY2 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RFWD2Q8NHY2 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RFWD2Q8NHY2 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RFWD2Q8NHY2 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
RFWD2Q8NHY2 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RFWD2Q8NHY2 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.45■□□□□ 0.7
RFWD2Q8NHY2 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RFWD2Q8NHY2 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RFWD2Q8NHY2 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RFWD2Q8NHY2 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RFWD2Q8NHY2 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RFWD2Q8NHY2 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RFWD2Q8NHY2 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RFWD2Q8NHY2 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.45■□□□□ 0.7
RFWD2Q8NHY2 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RFWD2Q8NHY2 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
RFWD2Q8NHY2 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RFWD2Q8NHY2 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RFWD2Q8NHY2 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
RFWD2Q8NHY2 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.45■□□□□ 0.7
RFWD2Q8NHY2 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RFWD2Q8NHY2 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RFWD2Q8NHY2 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms