Protein–RNA interactions for Protein: Q8NEZ2

VPS37A, Vacuolar protein sorting-associated protein 37A, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37AQ8NEZ2 BCL2-203ENST00000589955 5011 ntBASIC18.81■□□□□ 0.6
VPS37AQ8NEZ2 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VPS37AQ8NEZ2 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
VPS37AQ8NEZ2 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
VPS37AQ8NEZ2 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
VPS37AQ8NEZ2 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VPS37AQ8NEZ2 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
VPS37AQ8NEZ2 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.8■□□□□ 0.6
VPS37AQ8NEZ2 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
VPS37AQ8NEZ2 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.8■□□□□ 0.6
VPS37AQ8NEZ2 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
VPS37AQ8NEZ2 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
VPS37AQ8NEZ2 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
VPS37AQ8NEZ2 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.8■□□□□ 0.6
VPS37AQ8NEZ2 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
VPS37AQ8NEZ2 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VPS37AQ8NEZ2 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VPS37AQ8NEZ2 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
VPS37AQ8NEZ2 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
VPS37AQ8NEZ2 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
VPS37AQ8NEZ2 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VPS37AQ8NEZ2 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
VPS37AQ8NEZ2 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
VPS37AQ8NEZ2 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.8■□□□□ 0.6
VPS37AQ8NEZ2 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.8■□□□□ 0.6
VPS37AQ8NEZ2 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.8■□□□□ 0.6
VPS37AQ8NEZ2 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
VPS37AQ8NEZ2 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
VPS37AQ8NEZ2 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VPS37AQ8NEZ2 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.8■□□□□ 0.6
VPS37AQ8NEZ2 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VPS37AQ8NEZ2 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VPS37AQ8NEZ2 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
VPS37AQ8NEZ2 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
VPS37AQ8NEZ2 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.79■□□□□ 0.6
VPS37AQ8NEZ2 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
VPS37AQ8NEZ2 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.79■□□□□ 0.6
VPS37AQ8NEZ2 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
VPS37AQ8NEZ2 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
VPS37AQ8NEZ2 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
VPS37AQ8NEZ2 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
VPS37AQ8NEZ2 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
VPS37AQ8NEZ2 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
VPS37AQ8NEZ2 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
VPS37AQ8NEZ2 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VPS37AQ8NEZ2 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VPS37AQ8NEZ2 AC023632.3-201ENST00000521633 145 ntBASIC18.79■□□□□ 0.6
VPS37AQ8NEZ2 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC18.79■□□□□ 0.6
VPS37AQ8NEZ2 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.79■□□□□ 0.6
VPS37AQ8NEZ2 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.79■□□□□ 0.6
VPS37AQ8NEZ2 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.79■□□□□ 0.6
VPS37AQ8NEZ2 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18.79■□□□□ 0.6
VPS37AQ8NEZ2 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
VPS37AQ8NEZ2 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VPS37AQ8NEZ2 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
VPS37AQ8NEZ2 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
VPS37AQ8NEZ2 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VPS37AQ8NEZ2 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
VPS37AQ8NEZ2 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VPS37AQ8NEZ2 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
VPS37AQ8NEZ2 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VPS37AQ8NEZ2 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.79■□□□□ 0.6
VPS37AQ8NEZ2 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
VPS37AQ8NEZ2 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VPS37AQ8NEZ2 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.78■□□□□ 0.6
VPS37AQ8NEZ2 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.78■□□□□ 0.6
VPS37AQ8NEZ2 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.78■□□□□ 0.6
VPS37AQ8NEZ2 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
VPS37AQ8NEZ2 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VPS37AQ8NEZ2 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.78■□□□□ 0.6
VPS37AQ8NEZ2 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC18.78■□□□□ 0.6
VPS37AQ8NEZ2 AL512625.2-201ENST00000417533 625 ntBASIC18.78■□□□□ 0.6
VPS37AQ8NEZ2 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.78■□□□□ 0.6
VPS37AQ8NEZ2 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.78■□□□□ 0.6
VPS37AQ8NEZ2 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.78■□□□□ 0.6
VPS37AQ8NEZ2 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
VPS37AQ8NEZ2 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.78■□□□□ 0.6
VPS37AQ8NEZ2 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
VPS37AQ8NEZ2 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VPS37AQ8NEZ2 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
VPS37AQ8NEZ2 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
VPS37AQ8NEZ2 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
VPS37AQ8NEZ2 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.77■□□□□ 0.6
VPS37AQ8NEZ2 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.77■□□□□ 0.6
VPS37AQ8NEZ2 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
VPS37AQ8NEZ2 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.77■□□□□ 0.6
VPS37AQ8NEZ2 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
VPS37AQ8NEZ2 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
VPS37AQ8NEZ2 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
VPS37AQ8NEZ2 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
VPS37AQ8NEZ2 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
VPS37AQ8NEZ2 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC18.77■□□□□ 0.6
VPS37AQ8NEZ2 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
VPS37AQ8NEZ2 C2orf69P4-201ENST00000565394 541 ntBASIC18.77■□□□□ 0.6
VPS37AQ8NEZ2 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
VPS37AQ8NEZ2 RARRES2P6-201ENST00000567333 442 ntBASIC18.77■□□□□ 0.6
VPS37AQ8NEZ2 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.77■□□□□ 0.6
VPS37AQ8NEZ2 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
VPS37AQ8NEZ2 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
VPS37AQ8NEZ2 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms