Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
HIPK4Q8NE63 DPP3P2-201ENST00000416030 1696 ntBASIC19.14■□□□□ 0.65
HIPK4Q8NE63 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
HIPK4Q8NE63 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
HIPK4Q8NE63 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
HIPK4Q8NE63 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
HIPK4Q8NE63 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
HIPK4Q8NE63 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC19.13■□□□□ 0.65
HIPK4Q8NE63 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HIPK4Q8NE63 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.13■□□□□ 0.65
HIPK4Q8NE63 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HIPK4Q8NE63 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HIPK4Q8NE63 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
HIPK4Q8NE63 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HIPK4Q8NE63 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.13■□□□□ 0.65
HIPK4Q8NE63 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
HIPK4Q8NE63 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HIPK4Q8NE63 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
HIPK4Q8NE63 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
HIPK4Q8NE63 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HIPK4Q8NE63 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
HIPK4Q8NE63 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HIPK4Q8NE63 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HIPK4Q8NE63 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
HIPK4Q8NE63 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HIPK4Q8NE63 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HIPK4Q8NE63 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.12■□□□□ 0.65
HIPK4Q8NE63 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
HIPK4Q8NE63 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HIPK4Q8NE63 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.12■□□□□ 0.65
HIPK4Q8NE63 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.12■□□□□ 0.65
HIPK4Q8NE63 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HIPK4Q8NE63 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
HIPK4Q8NE63 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
HIPK4Q8NE63 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
HIPK4Q8NE63 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HIPK4Q8NE63 IRS3P-201ENST00000223076 1006 ntBASIC19.12■□□□□ 0.65
HIPK4Q8NE63 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
HIPK4Q8NE63 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
HIPK4Q8NE63 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
HIPK4Q8NE63 AC010141.2-201ENST00000452426 721 ntBASIC19.12■□□□□ 0.65
HIPK4Q8NE63 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.12■□□□□ 0.65
HIPK4Q8NE63 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HIPK4Q8NE63 HTR7P1-202ENST00000624664 4411 ntBASIC19.12■□□□□ 0.65
HIPK4Q8NE63 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HIPK4Q8NE63 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.12■□□□□ 0.65
HIPK4Q8NE63 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
HIPK4Q8NE63 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
HIPK4Q8NE63 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
HIPK4Q8NE63 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
HIPK4Q8NE63 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HIPK4Q8NE63 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HIPK4Q8NE63 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC19.11■□□□□ 0.65
HIPK4Q8NE63 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HIPK4Q8NE63 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
HIPK4Q8NE63 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.11■□□□□ 0.65
HIPK4Q8NE63 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HIPK4Q8NE63 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HIPK4Q8NE63 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.11■□□□□ 0.65
HIPK4Q8NE63 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
HIPK4Q8NE63 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HIPK4Q8NE63 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HIPK4Q8NE63 AC027612.3-201ENST00000413684 1047 ntBASIC19.11■□□□□ 0.65
HIPK4Q8NE63 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.11■□□□□ 0.65
HIPK4Q8NE63 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.11■□□□□ 0.65
HIPK4Q8NE63 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.11■□□□□ 0.65
HIPK4Q8NE63 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
HIPK4Q8NE63 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.11■□□□□ 0.65
HIPK4Q8NE63 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HIPK4Q8NE63 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
HIPK4Q8NE63 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
HIPK4Q8NE63 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.11■□□□□ 0.65
HIPK4Q8NE63 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.1■□□□□ 0.65
HIPK4Q8NE63 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HIPK4Q8NE63 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HIPK4Q8NE63 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HIPK4Q8NE63 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HIPK4Q8NE63 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HIPK4Q8NE63 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HIPK4Q8NE63 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HIPK4Q8NE63 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.1■□□□□ 0.65
HIPK4Q8NE63 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.1■□□□□ 0.65
HIPK4Q8NE63 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HIPK4Q8NE63 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HIPK4Q8NE63 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.1■□□□□ 0.65
HIPK4Q8NE63 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC19.1■□□□□ 0.65
HIPK4Q8NE63 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HIPK4Q8NE63 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
HIPK4Q8NE63 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HIPK4Q8NE63 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HIPK4Q8NE63 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.1■□□□□ 0.65
HIPK4Q8NE63 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
HIPK4Q8NE63 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
HIPK4Q8NE63 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.09■□□□□ 0.65
HIPK4Q8NE63 AC018470.1-201ENST00000624790 3129 ntBASIC19.09■□□□□ 0.65
HIPK4Q8NE63 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.09■□□□□ 0.65
HIPK4Q8NE63 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.09■□□□□ 0.65
HIPK4Q8NE63 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HIPK4Q8NE63 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HIPK4Q8NE63 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms