Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
SMC5Q8IY18 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
SMC5Q8IY18 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC24.47■■□□□ 1.51
SMC5Q8IY18 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC24.47■■□□□ 1.51
SMC5Q8IY18 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
SMC5Q8IY18 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
SMC5Q8IY18 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
SMC5Q8IY18 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC24.47■■□□□ 1.51
SMC5Q8IY18 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC24.47■■□□□ 1.51
SMC5Q8IY18 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC24.47■■□□□ 1.51
SMC5Q8IY18 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC24.47■■□□□ 1.51
SMC5Q8IY18 WT1-AS_3.1-201ENST00000613262 234 ntBASIC24.47■■□□□ 1.51
SMC5Q8IY18 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
SMC5Q8IY18 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC24.47■■□□□ 1.51
SMC5Q8IY18 AC098818.2-201ENST00000564925 2320 ntBASIC24.47■■□□□ 1.51
SMC5Q8IY18 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC24.47■■□□□ 1.51
SMC5Q8IY18 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
SMC5Q8IY18 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC24.47■■□□□ 1.51
SMC5Q8IY18 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC24.47■■□□□ 1.51
SMC5Q8IY18 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
SMC5Q8IY18 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
SMC5Q8IY18 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC24.46■■□□□ 1.51
SMC5Q8IY18 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC24.46■■□□□ 1.51
SMC5Q8IY18 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC24.46■■□□□ 1.51
SMC5Q8IY18 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
SMC5Q8IY18 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC24.46■■□□□ 1.51
SMC5Q8IY18 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
SMC5Q8IY18 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
SMC5Q8IY18 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
SMC5Q8IY18 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
SMC5Q8IY18 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
SMC5Q8IY18 PPP1R14BP2-201ENST00000426284 444 ntBASIC24.46■■□□□ 1.51
SMC5Q8IY18 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC24.46■■□□□ 1.51
SMC5Q8IY18 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC24.46■■□□□ 1.51
SMC5Q8IY18 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC24.46■■□□□ 1.51
SMC5Q8IY18 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC24.46■■□□□ 1.51
SMC5Q8IY18 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
SMC5Q8IY18 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
SMC5Q8IY18 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
SMC5Q8IY18 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC24.46■■□□□ 1.51
SMC5Q8IY18 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
SMC5Q8IY18 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC24.46■■□□□ 1.51
SMC5Q8IY18 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
SMC5Q8IY18 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
SMC5Q8IY18 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
SMC5Q8IY18 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC24.45■■□□□ 1.51
SMC5Q8IY18 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
SMC5Q8IY18 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.5
SMC5Q8IY18 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC24.45■■□□□ 1.5
SMC5Q8IY18 AC087289.5-201ENST00000586076 3175 ntBASIC24.45■■□□□ 1.5
SMC5Q8IY18 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC24.45■■□□□ 1.5
SMC5Q8IY18 AL032819.2-201ENST00000624543 2162 ntBASIC24.45■■□□□ 1.5
SMC5Q8IY18 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
SMC5Q8IY18 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
SMC5Q8IY18 CALM3-202ENST00000391918 702 ntTSL 2 BASIC24.45■■□□□ 1.5
SMC5Q8IY18 GGT1-206ENST00000404223 952 ntTSL 2 BASIC24.45■■□□□ 1.5
SMC5Q8IY18 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC24.45■■□□□ 1.5
SMC5Q8IY18 BET1L-207ENST00000529614 560 ntTSL 5 BASIC24.45■■□□□ 1.5
SMC5Q8IY18 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC24.45■■□□□ 1.5
SMC5Q8IY18 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
SMC5Q8IY18 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
SMC5Q8IY18 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
SMC5Q8IY18 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC24.45■■□□□ 1.5
SMC5Q8IY18 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
SMC5Q8IY18 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC24.45■■□□□ 1.5
SMC5Q8IY18 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC24.45■■□□□ 1.5
SMC5Q8IY18 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
SMC5Q8IY18 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.5
SMC5Q8IY18 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC24.45■■□□□ 1.5
SMC5Q8IY18 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
SMC5Q8IY18 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC24.44■■□□□ 1.5
SMC5Q8IY18 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC24.44■■□□□ 1.5
SMC5Q8IY18 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC24.44■■□□□ 1.5
SMC5Q8IY18 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC24.44■■□□□ 1.5
SMC5Q8IY18 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SMC5Q8IY18 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
SMC5Q8IY18 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC24.44■■□□□ 1.5
SMC5Q8IY18 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC24.44■■□□□ 1.5
SMC5Q8IY18 GAMT-205ENST00000640762 751 ntTSL 5 BASIC24.44■■□□□ 1.5
SMC5Q8IY18 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC24.44■■□□□ 1.5
SMC5Q8IY18 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC24.44■■□□□ 1.5
SMC5Q8IY18 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SMC5Q8IY18 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SMC5Q8IY18 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC24.44■■□□□ 1.5
SMC5Q8IY18 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC24.44■■□□□ 1.5
SMC5Q8IY18 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SMC5Q8IY18 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SMC5Q8IY18 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
SMC5Q8IY18 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC24.43■■□□□ 1.5
SMC5Q8IY18 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC24.43■■□□□ 1.5
SMC5Q8IY18 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
SMC5Q8IY18 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
SMC5Q8IY18 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
SMC5Q8IY18 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC24.43■■□□□ 1.5
SMC5Q8IY18 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC24.43■■□□□ 1.5
SMC5Q8IY18 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC24.43■■□□□ 1.5
SMC5Q8IY18 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
SMC5Q8IY18 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC24.43■■□□□ 1.5
SMC5Q8IY18 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC24.43■■□□□ 1.5
SMC5Q8IY18 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms