Protein–RNA interactions for Protein: Q8IXR9

C12orf56, Uncharacterized protein C12orf56, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf56Q8IXR9 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC21.48■■□□□ 1.03
C12orf56Q8IXR9 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC21.48■■□□□ 1.03
C12orf56Q8IXR9 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
C12orf56Q8IXR9 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
C12orf56Q8IXR9 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC21.48■■□□□ 1.03
C12orf56Q8IXR9 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC21.48■■□□□ 1.03
C12orf56Q8IXR9 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC21.48■■□□□ 1.03
C12orf56Q8IXR9 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC21.48■■□□□ 1.03
C12orf56Q8IXR9 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC21.48■■□□□ 1.03
C12orf56Q8IXR9 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC21.48■■□□□ 1.03
C12orf56Q8IXR9 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC21.48■■□□□ 1.03
C12orf56Q8IXR9 PNN-205ENST00000556530 601 ntTSL 2 BASIC21.48■■□□□ 1.03
C12orf56Q8IXR9 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC21.48■■□□□ 1.03
C12orf56Q8IXR9 AC069544.1-201ENST00000609399 999 ntBASIC21.48■■□□□ 1.03
C12orf56Q8IXR9 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
C12orf56Q8IXR9 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC21.48■■□□□ 1.03
C12orf56Q8IXR9 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
C12orf56Q8IXR9 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC21.48■■□□□ 1.03
C12orf56Q8IXR9 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.48■■□□□ 1.03
C12orf56Q8IXR9 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
C12orf56Q8IXR9 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
C12orf56Q8IXR9 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
C12orf56Q8IXR9 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
C12orf56Q8IXR9 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
C12orf56Q8IXR9 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC21.47■■□□□ 1.03
C12orf56Q8IXR9 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
C12orf56Q8IXR9 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
C12orf56Q8IXR9 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC21.47■■□□□ 1.03
C12orf56Q8IXR9 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC21.47■■□□□ 1.03
C12orf56Q8IXR9 KRT17P3-201ENST00000420566 1262 ntBASIC21.47■■□□□ 1.03
C12orf56Q8IXR9 THEM4-205ENST00000489410 643 ntTSL 2 BASIC21.47■■□□□ 1.03
C12orf56Q8IXR9 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
C12orf56Q8IXR9 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC21.47■■□□□ 1.03
C12orf56Q8IXR9 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
C12orf56Q8IXR9 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC21.47■■□□□ 1.03
C12orf56Q8IXR9 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
C12orf56Q8IXR9 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC21.47■■□□□ 1.03
C12orf56Q8IXR9 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
C12orf56Q8IXR9 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC21.46■■□□□ 1.03
C12orf56Q8IXR9 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
C12orf56Q8IXR9 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
C12orf56Q8IXR9 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
C12orf56Q8IXR9 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
C12orf56Q8IXR9 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC21.46■■□□□ 1.03
C12orf56Q8IXR9 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
C12orf56Q8IXR9 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
C12orf56Q8IXR9 YBX1P10-201ENST00000444752 975 ntBASIC21.46■■□□□ 1.03
C12orf56Q8IXR9 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC21.46■■□□□ 1.03
C12orf56Q8IXR9 MTDHP1-201ENST00000605323 784 ntBASIC21.46■■□□□ 1.03
C12orf56Q8IXR9 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
C12orf56Q8IXR9 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC21.46■■□□□ 1.03
C12orf56Q8IXR9 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
C12orf56Q8IXR9 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
C12orf56Q8IXR9 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
C12orf56Q8IXR9 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
C12orf56Q8IXR9 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
C12orf56Q8IXR9 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
C12orf56Q8IXR9 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
C12orf56Q8IXR9 AP006587.1-201ENST00000534129 1502 ntBASIC21.45■■□□□ 1.02
C12orf56Q8IXR9 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
C12orf56Q8IXR9 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.45■■□□□ 1.02
C12orf56Q8IXR9 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
C12orf56Q8IXR9 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
C12orf56Q8IXR9 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC21.45■■□□□ 1.02
C12orf56Q8IXR9 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC21.45■■□□□ 1.02
C12orf56Q8IXR9 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC21.45■■□□□ 1.02
C12orf56Q8IXR9 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC21.45■■□□□ 1.02
C12orf56Q8IXR9 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC21.45■■□□□ 1.02
C12orf56Q8IXR9 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
C12orf56Q8IXR9 MIR4651-201ENST00000582622 73 ntBASIC21.45■■□□□ 1.02
C12orf56Q8IXR9 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC21.45■■□□□ 1.02
C12orf56Q8IXR9 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC21.45■■□□□ 1.02
C12orf56Q8IXR9 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
C12orf56Q8IXR9 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC21.45■■□□□ 1.02
C12orf56Q8IXR9 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
C12orf56Q8IXR9 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
C12orf56Q8IXR9 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
C12orf56Q8IXR9 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC21.44■■□□□ 1.02
C12orf56Q8IXR9 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC21.44■■□□□ 1.02
C12orf56Q8IXR9 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
C12orf56Q8IXR9 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
C12orf56Q8IXR9 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
C12orf56Q8IXR9 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
C12orf56Q8IXR9 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
C12orf56Q8IXR9 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
C12orf56Q8IXR9 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
C12orf56Q8IXR9 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
C12orf56Q8IXR9 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
C12orf56Q8IXR9 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
C12orf56Q8IXR9 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
C12orf56Q8IXR9 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC21.44■■□□□ 1.02
C12orf56Q8IXR9 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
C12orf56Q8IXR9 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC21.44■■□□□ 1.02
C12orf56Q8IXR9 AC233263.1-201ENST00000578059 224 ntBASIC21.44■■□□□ 1.02
C12orf56Q8IXR9 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
C12orf56Q8IXR9 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
C12orf56Q8IXR9 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC21.44■■□□□ 1.02
C12orf56Q8IXR9 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
C12orf56Q8IXR9 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
C12orf56Q8IXR9 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms