Protein–RNA interactions for Protein: Q86YV9

HPS6, Hermansky-Pudlak syndrome 6 protein, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS6Q86YV9 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
HPS6Q86YV9 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HPS6Q86YV9 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HPS6Q86YV9 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.44■□□□□ 0.7
HPS6Q86YV9 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.44■□□□□ 0.7
HPS6Q86YV9 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HPS6Q86YV9 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HPS6Q86YV9 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HPS6Q86YV9 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.44■□□□□ 0.7
HPS6Q86YV9 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.43■□□□□ 0.7
HPS6Q86YV9 KRT16P2-201ENST00000414673 1423 ntBASIC19.43■□□□□ 0.7
HPS6Q86YV9 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.43■□□□□ 0.7
HPS6Q86YV9 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
HPS6Q86YV9 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.43■□□□□ 0.7
HPS6Q86YV9 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
HPS6Q86YV9 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC19.43■□□□□ 0.7
HPS6Q86YV9 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HPS6Q86YV9 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.43■□□□□ 0.7
HPS6Q86YV9 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.43■□□□□ 0.7
HPS6Q86YV9 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.43■□□□□ 0.7
HPS6Q86YV9 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HPS6Q86YV9 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.43■□□□□ 0.7
HPS6Q86YV9 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.43■□□□□ 0.7
HPS6Q86YV9 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HPS6Q86YV9 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HPS6Q86YV9 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HPS6Q86YV9 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.43■□□□□ 0.7
HPS6Q86YV9 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.43■□□□□ 0.7
HPS6Q86YV9 AC093484.2-201ENST00000580996 2166 ntBASIC19.43■□□□□ 0.7
HPS6Q86YV9 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HPS6Q86YV9 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
HPS6Q86YV9 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
HPS6Q86YV9 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
HPS6Q86YV9 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
HPS6Q86YV9 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.42■□□□□ 0.7
HPS6Q86YV9 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
HPS6Q86YV9 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HPS6Q86YV9 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
HPS6Q86YV9 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
HPS6Q86YV9 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HPS6Q86YV9 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HPS6Q86YV9 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.42■□□□□ 0.7
HPS6Q86YV9 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
HPS6Q86YV9 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
HPS6Q86YV9 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HPS6Q86YV9 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HPS6Q86YV9 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.42■□□□□ 0.7
HPS6Q86YV9 DET1-205ENST00000558413 583 ntTSL 4 BASIC19.42■□□□□ 0.7
HPS6Q86YV9 AC008687.6-201ENST00000596318 630 ntBASIC19.42■□□□□ 0.7
HPS6Q86YV9 AC243732.1-201ENST00000612648 864 ntBASIC19.42■□□□□ 0.7
HPS6Q86YV9 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HPS6Q86YV9 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.42■□□□□ 0.7
HPS6Q86YV9 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.42■□□□□ 0.7
HPS6Q86YV9 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.42■□□□□ 0.7
HPS6Q86YV9 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HPS6Q86YV9 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
HPS6Q86YV9 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HPS6Q86YV9 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HPS6Q86YV9 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
HPS6Q86YV9 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HPS6Q86YV9 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.41■□□□□ 0.7
HPS6Q86YV9 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HPS6Q86YV9 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.41■□□□□ 0.7
HPS6Q86YV9 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
HPS6Q86YV9 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HPS6Q86YV9 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
HPS6Q86YV9 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
HPS6Q86YV9 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HPS6Q86YV9 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
HPS6Q86YV9 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC19.41■□□□□ 0.7
HPS6Q86YV9 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.41■□□□□ 0.7
HPS6Q86YV9 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
HPS6Q86YV9 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.41■□□□□ 0.7
HPS6Q86YV9 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HPS6Q86YV9 AL591742.1-201ENST00000604433 565 ntBASIC19.41■□□□□ 0.7
HPS6Q86YV9 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.41■□□□□ 0.7
HPS6Q86YV9 NEFHP1-201ENST00000412845 2629 ntBASIC19.41■□□□□ 0.7
HPS6Q86YV9 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
HPS6Q86YV9 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
HPS6Q86YV9 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
HPS6Q86YV9 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.41■□□□□ 0.7
HPS6Q86YV9 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
HPS6Q86YV9 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
HPS6Q86YV9 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HPS6Q86YV9 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HPS6Q86YV9 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.4■□□□□ 0.7
HPS6Q86YV9 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HPS6Q86YV9 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.4■□□□□ 0.7
HPS6Q86YV9 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
HPS6Q86YV9 BX276092.2-201ENST00000417668 665 ntBASIC19.4■□□□□ 0.7
HPS6Q86YV9 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.4■□□□□ 0.7
HPS6Q86YV9 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.4■□□□□ 0.7
HPS6Q86YV9 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.4■□□□□ 0.7
HPS6Q86YV9 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.4■□□□□ 0.7
HPS6Q86YV9 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HPS6Q86YV9 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HPS6Q86YV9 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HPS6Q86YV9 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HPS6Q86YV9 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HPS6Q86YV9 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms