Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.41■□□□□ 0.38
RTTNQ86VV8 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RTTNQ86VV8 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC17.41■□□□□ 0.38
RTTNQ86VV8 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RTTNQ86VV8 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RTTNQ86VV8 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
RTTNQ86VV8 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RTTNQ86VV8 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
RTTNQ86VV8 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RTTNQ86VV8 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RTTNQ86VV8 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC17.41■□□□□ 0.38
RTTNQ86VV8 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RTTNQ86VV8 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RTTNQ86VV8 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RTTNQ86VV8 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RTTNQ86VV8 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RTTNQ86VV8 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RTTNQ86VV8 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC17.41■□□□□ 0.38
RTTNQ86VV8 MIR4497-201ENST00000583208 89 ntBASIC17.41■□□□□ 0.38
RTTNQ86VV8 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RTTNQ86VV8 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RTTNQ86VV8 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
RTTNQ86VV8 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RTTNQ86VV8 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC17.41■□□□□ 0.38
RTTNQ86VV8 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RTTNQ86VV8 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RTTNQ86VV8 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RTTNQ86VV8 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RTTNQ86VV8 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RTTNQ86VV8 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC17.4■□□□□ 0.38
RTTNQ86VV8 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RTTNQ86VV8 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC17.4■□□□□ 0.38
RTTNQ86VV8 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
RTTNQ86VV8 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RTTNQ86VV8 AC097658.1-201ENST00000475555 843 ntBASIC17.4■□□□□ 0.38
RTTNQ86VV8 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RTTNQ86VV8 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC17.4■□□□□ 0.38
RTTNQ86VV8 KRT18P21-201ENST00000515767 1272 ntBASIC17.4■□□□□ 0.38
RTTNQ86VV8 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RTTNQ86VV8 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RTTNQ86VV8 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RTTNQ86VV8 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RTTNQ86VV8 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RTTNQ86VV8 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RTTNQ86VV8 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RTTNQ86VV8 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RTTNQ86VV8 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC17.4■□□□□ 0.38
RTTNQ86VV8 RHOD-202ENST00000532559 538 ntTSL 3 BASIC17.4■□□□□ 0.38
RTTNQ86VV8 KLF2-202ENST00000592003 564 ntTSL 3 BASIC17.4■□□□□ 0.38
RTTNQ86VV8 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RTTNQ86VV8 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC17.4■□□□□ 0.38
RTTNQ86VV8 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RTTNQ86VV8 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RTTNQ86VV8 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RTTNQ86VV8 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.39■□□□□ 0.38
RTTNQ86VV8 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
RTTNQ86VV8 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RTTNQ86VV8 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RTTNQ86VV8 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
RTTNQ86VV8 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
RTTNQ86VV8 AC128676.1-201ENST00000454392 318 ntBASIC17.39■□□□□ 0.37
RTTNQ86VV8 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC17.39■□□□□ 0.37
RTTNQ86VV8 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
RTTNQ86VV8 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC17.39■□□□□ 0.37
RTTNQ86VV8 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RTTNQ86VV8 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RTTNQ86VV8 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RTTNQ86VV8 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RTTNQ86VV8 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.39■□□□□ 0.37
RTTNQ86VV8 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
RTTNQ86VV8 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RTTNQ86VV8 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RTTNQ86VV8 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RTTNQ86VV8 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RTTNQ86VV8 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
RTTNQ86VV8 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RTTNQ86VV8 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RTTNQ86VV8 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RTTNQ86VV8 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RTTNQ86VV8 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RTTNQ86VV8 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
RTTNQ86VV8 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RTTNQ86VV8 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RTTNQ86VV8 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RTTNQ86VV8 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RTTNQ86VV8 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RTTNQ86VV8 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.38■□□□□ 0.37
RTTNQ86VV8 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RTTNQ86VV8 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RTTNQ86VV8 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC17.38■□□□□ 0.37
RTTNQ86VV8 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
RTTNQ86VV8 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RTTNQ86VV8 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RTTNQ86VV8 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC17.38■□□□□ 0.37
RTTNQ86VV8 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RTTNQ86VV8 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
RTTNQ86VV8 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RTTNQ86VV8 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.37■□□□□ 0.37
RTTNQ86VV8 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
RTTNQ86VV8 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms