Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.58■□□□□ 0.88
TTC39BQ5VTQ0 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
TTC39BQ5VTQ0 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TTC39BQ5VTQ0 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.58■□□□□ 0.88
TTC39BQ5VTQ0 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TTC39BQ5VTQ0 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.58■□□□□ 0.88
TTC39BQ5VTQ0 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20.58■□□□□ 0.88
TTC39BQ5VTQ0 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.57■□□□□ 0.88
TTC39BQ5VTQ0 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.57■□□□□ 0.88
TTC39BQ5VTQ0 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.57■□□□□ 0.88
TTC39BQ5VTQ0 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TTC39BQ5VTQ0 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TTC39BQ5VTQ0 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
TTC39BQ5VTQ0 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
TTC39BQ5VTQ0 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TTC39BQ5VTQ0 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.57■□□□□ 0.88
TTC39BQ5VTQ0 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.57■□□□□ 0.88
TTC39BQ5VTQ0 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.57■□□□□ 0.88
TTC39BQ5VTQ0 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.57■□□□□ 0.88
TTC39BQ5VTQ0 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.57■□□□□ 0.88
TTC39BQ5VTQ0 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TTC39BQ5VTQ0 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.57■□□□□ 0.88
TTC39BQ5VTQ0 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
TTC39BQ5VTQ0 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.57■□□□□ 0.88
TTC39BQ5VTQ0 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
TTC39BQ5VTQ0 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.57■□□□□ 0.88
TTC39BQ5VTQ0 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TTC39BQ5VTQ0 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TTC39BQ5VTQ0 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
TTC39BQ5VTQ0 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TTC39BQ5VTQ0 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
TTC39BQ5VTQ0 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TTC39BQ5VTQ0 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TTC39BQ5VTQ0 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.56■□□□□ 0.88
TTC39BQ5VTQ0 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.56■□□□□ 0.88
TTC39BQ5VTQ0 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
TTC39BQ5VTQ0 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TTC39BQ5VTQ0 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TTC39BQ5VTQ0 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TTC39BQ5VTQ0 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
TTC39BQ5VTQ0 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TTC39BQ5VTQ0 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
TTC39BQ5VTQ0 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC20.56■□□□□ 0.88
TTC39BQ5VTQ0 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
TTC39BQ5VTQ0 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.56■□□□□ 0.88
TTC39BQ5VTQ0 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC20.56■□□□□ 0.88
TTC39BQ5VTQ0 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
TTC39BQ5VTQ0 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.56■□□□□ 0.88
TTC39BQ5VTQ0 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TTC39BQ5VTQ0 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
TTC39BQ5VTQ0 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC20.55■□□□□ 0.88
TTC39BQ5VTQ0 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TTC39BQ5VTQ0 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TTC39BQ5VTQ0 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
TTC39BQ5VTQ0 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
TTC39BQ5VTQ0 KRT16P6-202ENST00000425692 1426 ntBASIC20.55■□□□□ 0.88
TTC39BQ5VTQ0 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.55■□□□□ 0.88
TTC39BQ5VTQ0 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
TTC39BQ5VTQ0 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TTC39BQ5VTQ0 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TTC39BQ5VTQ0 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
TTC39BQ5VTQ0 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
TTC39BQ5VTQ0 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TTC39BQ5VTQ0 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TTC39BQ5VTQ0 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
TTC39BQ5VTQ0 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20.55■□□□□ 0.88
TTC39BQ5VTQ0 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.55■□□□□ 0.88
TTC39BQ5VTQ0 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20.55■□□□□ 0.88
TTC39BQ5VTQ0 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
TTC39BQ5VTQ0 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
TTC39BQ5VTQ0 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TTC39BQ5VTQ0 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
TTC39BQ5VTQ0 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TTC39BQ5VTQ0 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TTC39BQ5VTQ0 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.55■□□□□ 0.88
TTC39BQ5VTQ0 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TTC39BQ5VTQ0 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.54■□□□□ 0.88
TTC39BQ5VTQ0 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TTC39BQ5VTQ0 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
TTC39BQ5VTQ0 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
TTC39BQ5VTQ0 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.54■□□□□ 0.88
TTC39BQ5VTQ0 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TTC39BQ5VTQ0 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TTC39BQ5VTQ0 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TTC39BQ5VTQ0 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TTC39BQ5VTQ0 RPS2P52-201ENST00000469610 820 ntBASIC20.54■□□□□ 0.88
TTC39BQ5VTQ0 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20.54■□□□□ 0.88
TTC39BQ5VTQ0 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC20.54■□□□□ 0.88
TTC39BQ5VTQ0 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
TTC39BQ5VTQ0 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
TTC39BQ5VTQ0 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TTC39BQ5VTQ0 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
TTC39BQ5VTQ0 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.54■□□□□ 0.88
TTC39BQ5VTQ0 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TTC39BQ5VTQ0 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.54■□□□□ 0.88
TTC39BQ5VTQ0 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
TTC39BQ5VTQ0 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TTC39BQ5VTQ0 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
TTC39BQ5VTQ0 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.53■□□□□ 0.88
TTC39BQ5VTQ0 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms