Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.97■□□□□ 0.63
RNF220Q5VTB9 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF220Q5VTB9 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF220Q5VTB9 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.97■□□□□ 0.63
RNF220Q5VTB9 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF220Q5VTB9 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.97■□□□□ 0.63
RNF220Q5VTB9 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF220Q5VTB9 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
RNF220Q5VTB9 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF220Q5VTB9 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF220Q5VTB9 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RNF220Q5VTB9 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.96■□□□□ 0.63
RNF220Q5VTB9 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RNF220Q5VTB9 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF220Q5VTB9 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.96■□□□□ 0.63
RNF220Q5VTB9 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
RNF220Q5VTB9 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF220Q5VTB9 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF220Q5VTB9 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
RNF220Q5VTB9 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RNF220Q5VTB9 SLC7A5P1-201ENST00000568957 537 ntBASIC18.96■□□□□ 0.63
RNF220Q5VTB9 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF220Q5VTB9 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
RNF220Q5VTB9 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC18.96■□□□□ 0.63
RNF220Q5VTB9 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF220Q5VTB9 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF220Q5VTB9 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
RNF220Q5VTB9 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
RNF220Q5VTB9 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF220Q5VTB9 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
RNF220Q5VTB9 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
RNF220Q5VTB9 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF220Q5VTB9 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RNF220Q5VTB9 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF220Q5VTB9 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.96■□□□□ 0.63
RNF220Q5VTB9 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF220Q5VTB9 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RNF220Q5VTB9 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.95■□□□□ 0.62
RNF220Q5VTB9 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF220Q5VTB9 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.95■□□□□ 0.62
RNF220Q5VTB9 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF220Q5VTB9 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF220Q5VTB9 FP700111.2-201ENST00000619190 1892 ntBASIC18.95■□□□□ 0.62
RNF220Q5VTB9 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF220Q5VTB9 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF220Q5VTB9 KRT19P1-201ENST00000405746 1186 ntBASIC18.95■□□□□ 0.62
RNF220Q5VTB9 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.95■□□□□ 0.62
RNF220Q5VTB9 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC18.95■□□□□ 0.62
RNF220Q5VTB9 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC18.95■□□□□ 0.62
RNF220Q5VTB9 AC243732.1-201ENST00000612648 864 ntBASIC18.95■□□□□ 0.62
RNF220Q5VTB9 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RNF220Q5VTB9 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF220Q5VTB9 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF220Q5VTB9 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF220Q5VTB9 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.95■□□□□ 0.62
RNF220Q5VTB9 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RNF220Q5VTB9 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
RNF220Q5VTB9 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
RNF220Q5VTB9 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RNF220Q5VTB9 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.94■□□□□ 0.62
RNF220Q5VTB9 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
RNF220Q5VTB9 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RNF220Q5VTB9 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC18.94■□□□□ 0.62
RNF220Q5VTB9 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC18.94■□□□□ 0.62
RNF220Q5VTB9 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.94■□□□□ 0.62
RNF220Q5VTB9 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC18.94■□□□□ 0.62
RNF220Q5VTB9 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RNF220Q5VTB9 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
RNF220Q5VTB9 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
RNF220Q5VTB9 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
RNF220Q5VTB9 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RNF220Q5VTB9 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
RNF220Q5VTB9 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
RNF220Q5VTB9 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF220Q5VTB9 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF220Q5VTB9 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.93■□□□□ 0.62
RNF220Q5VTB9 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RNF220Q5VTB9 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF220Q5VTB9 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.93■□□□□ 0.62
RNF220Q5VTB9 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.93■□□□□ 0.62
RNF220Q5VTB9 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
RNF220Q5VTB9 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC18.93■□□□□ 0.62
RNF220Q5VTB9 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
RNF220Q5VTB9 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.93■□□□□ 0.62
RNF220Q5VTB9 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RNF220Q5VTB9 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
RNF220Q5VTB9 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.93■□□□□ 0.62
RNF220Q5VTB9 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RNF220Q5VTB9 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RNF220Q5VTB9 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RNF220Q5VTB9 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC18.93■□□□□ 0.62
RNF220Q5VTB9 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC18.93■□□□□ 0.62
RNF220Q5VTB9 GALNS-213ENST00000569433 723 ntTSL 3 BASIC18.93■□□□□ 0.62
RNF220Q5VTB9 FGF8-207ENST00000618991 856 ntTSL 3 BASIC18.93■□□□□ 0.62
RNF220Q5VTB9 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC18.93■□□□□ 0.62
RNF220Q5VTB9 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC18.93■□□□□ 0.62
RNF220Q5VTB9 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RNF220Q5VTB9 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF220Q5VTB9 AC104581.1-202ENST00000635932 2618 ntBASIC18.93■□□□□ 0.62
RNF220Q5VTB9 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms