Protein–RNA interactions for Protein: Q3KNV8

PCGF3, Polycomb group RING finger protein 3, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3Q3KNV8 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCGF3Q3KNV8 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCGF3Q3KNV8 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCGF3Q3KNV8 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCGF3Q3KNV8 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC17.45■□□□□ 0.38
PCGF3Q3KNV8 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCGF3Q3KNV8 DENND3-207ENST00000518347 850 ntTSL 2 BASIC17.45■□□□□ 0.38
PCGF3Q3KNV8 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC17.45■□□□□ 0.38
PCGF3Q3KNV8 AC011484.1-201ENST00000377652 1995 ntBASIC17.45■□□□□ 0.38
PCGF3Q3KNV8 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCGF3Q3KNV8 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.45■□□□□ 0.38
PCGF3Q3KNV8 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCGF3Q3KNV8 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
PCGF3Q3KNV8 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCGF3Q3KNV8 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCGF3Q3KNV8 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCGF3Q3KNV8 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
PCGF3Q3KNV8 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCGF3Q3KNV8 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.44■□□□□ 0.38
PCGF3Q3KNV8 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC17.44■□□□□ 0.38
PCGF3Q3KNV8 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC17.44■□□□□ 0.38
PCGF3Q3KNV8 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCGF3Q3KNV8 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PCGF3Q3KNV8 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC17.44■□□□□ 0.38
PCGF3Q3KNV8 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC17.44■□□□□ 0.38
PCGF3Q3KNV8 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC17.44■□□□□ 0.38
PCGF3Q3KNV8 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC17.44■□□□□ 0.38
PCGF3Q3KNV8 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC17.44■□□□□ 0.38
PCGF3Q3KNV8 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
PCGF3Q3KNV8 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCGF3Q3KNV8 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC17.44■□□□□ 0.38
PCGF3Q3KNV8 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCGF3Q3KNV8 AC125437.2-201ENST00000625180 2167 ntBASIC17.44■□□□□ 0.38
PCGF3Q3KNV8 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCGF3Q3KNV8 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCGF3Q3KNV8 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.44■□□□□ 0.38
PCGF3Q3KNV8 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCGF3Q3KNV8 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.44■□□□□ 0.38
PCGF3Q3KNV8 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCGF3Q3KNV8 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCGF3Q3KNV8 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
PCGF3Q3KNV8 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
PCGF3Q3KNV8 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCGF3Q3KNV8 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.44■□□□□ 0.38
PCGF3Q3KNV8 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC17.44■□□□□ 0.38
PCGF3Q3KNV8 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PCGF3Q3KNV8 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCGF3Q3KNV8 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
PCGF3Q3KNV8 TNXA-203ENST00000507684 2038 ntBASIC17.43■□□□□ 0.38
PCGF3Q3KNV8 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCGF3Q3KNV8 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PCGF3Q3KNV8 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCGF3Q3KNV8 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PCGF3Q3KNV8 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.43■□□□□ 0.38
PCGF3Q3KNV8 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.43■□□□□ 0.38
PCGF3Q3KNV8 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
PCGF3Q3KNV8 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
PCGF3Q3KNV8 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC17.43■□□□□ 0.38
PCGF3Q3KNV8 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCGF3Q3KNV8 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.43■□□□□ 0.38
PCGF3Q3KNV8 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCGF3Q3KNV8 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC17.43■□□□□ 0.38
PCGF3Q3KNV8 KRT18P68-201ENST00000392293 1000 ntBASIC17.43■□□□□ 0.38
PCGF3Q3KNV8 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
PCGF3Q3KNV8 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCGF3Q3KNV8 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC17.43■□□□□ 0.38
PCGF3Q3KNV8 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC17.43■□□□□ 0.38
PCGF3Q3KNV8 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC17.43■□□□□ 0.38
PCGF3Q3KNV8 AC097658.1-201ENST00000475555 843 ntBASIC17.43■□□□□ 0.38
PCGF3Q3KNV8 HES2-205ENST00000487437 968 ntTSL 3 BASIC17.43■□□□□ 0.38
PCGF3Q3KNV8 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC17.43■□□□□ 0.38
PCGF3Q3KNV8 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC17.43■□□□□ 0.38
PCGF3Q3KNV8 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCGF3Q3KNV8 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCGF3Q3KNV8 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCGF3Q3KNV8 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC17.43■□□□□ 0.38
PCGF3Q3KNV8 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCGF3Q3KNV8 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
PCGF3Q3KNV8 CYP21A1P-202ENST00000354927 1481 ntBASIC17.43■□□□□ 0.38
PCGF3Q3KNV8 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC17.43■□□□□ 0.38
PCGF3Q3KNV8 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC17.42■□□□□ 0.38
PCGF3Q3KNV8 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.42■□□□□ 0.38
PCGF3Q3KNV8 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
PCGF3Q3KNV8 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCGF3Q3KNV8 AC004408.2-201ENST00000623613 2777 ntBASIC17.42■□□□□ 0.38
PCGF3Q3KNV8 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCGF3Q3KNV8 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCGF3Q3KNV8 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCGF3Q3KNV8 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCGF3Q3KNV8 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCGF3Q3KNV8 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCGF3Q3KNV8 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC17.42■□□□□ 0.38
PCGF3Q3KNV8 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
PCGF3Q3KNV8 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC17.42■□□□□ 0.38
PCGF3Q3KNV8 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC17.42■□□□□ 0.38
PCGF3Q3KNV8 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PCGF3Q3KNV8 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.42■□□□□ 0.38
PCGF3Q3KNV8 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCGF3Q3KNV8 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCGF3Q3KNV8 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms