Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC21.15■□□□□ 0.98
CTC1Q2NKJ3 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC21.15■□□□□ 0.98
CTC1Q2NKJ3 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC21.15■□□□□ 0.98
CTC1Q2NKJ3 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
CTC1Q2NKJ3 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CTC1Q2NKJ3 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC21.15■□□□□ 0.98
CTC1Q2NKJ3 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC21.15■□□□□ 0.98
CTC1Q2NKJ3 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CTC1Q2NKJ3 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CTC1Q2NKJ3 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CTC1Q2NKJ3 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC21.14■□□□□ 0.98
CTC1Q2NKJ3 KRT16P1-201ENST00000399124 1418 ntBASIC21.14■□□□□ 0.98
CTC1Q2NKJ3 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
CTC1Q2NKJ3 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC21.14■□□□□ 0.97
CTC1Q2NKJ3 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CTC1Q2NKJ3 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
CTC1Q2NKJ3 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.14■□□□□ 0.97
CTC1Q2NKJ3 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC21.14■□□□□ 0.97
CTC1Q2NKJ3 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CTC1Q2NKJ3 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC21.14■□□□□ 0.97
CTC1Q2NKJ3 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC21.14■□□□□ 0.97
CTC1Q2NKJ3 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.14■□□□□ 0.97
CTC1Q2NKJ3 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.14■□□□□ 0.97
CTC1Q2NKJ3 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
CTC1Q2NKJ3 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CTC1Q2NKJ3 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC21.14■□□□□ 0.97
CTC1Q2NKJ3 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
CTC1Q2NKJ3 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CTC1Q2NKJ3 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC21.14■□□□□ 0.97
CTC1Q2NKJ3 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CTC1Q2NKJ3 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CTC1Q2NKJ3 LINC01006-201ENST00000333319 2292 ntBASIC21.13■□□□□ 0.97
CTC1Q2NKJ3 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
CTC1Q2NKJ3 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CTC1Q2NKJ3 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CTC1Q2NKJ3 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CTC1Q2NKJ3 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CTC1Q2NKJ3 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CTC1Q2NKJ3 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC21.13■□□□□ 0.97
CTC1Q2NKJ3 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
CTC1Q2NKJ3 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CTC1Q2NKJ3 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
CTC1Q2NKJ3 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC21.13■□□□□ 0.97
CTC1Q2NKJ3 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC21.13■□□□□ 0.97
CTC1Q2NKJ3 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC21.13■□□□□ 0.97
CTC1Q2NKJ3 CLN6-221ENST00000637494 765 ntTSL 5 BASIC21.13■□□□□ 0.97
CTC1Q2NKJ3 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CTC1Q2NKJ3 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CTC1Q2NKJ3 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CTC1Q2NKJ3 LGALS8-AS1-201ENST00000487567 1457 ntBASIC21.13■□□□□ 0.97
CTC1Q2NKJ3 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CTC1Q2NKJ3 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CTC1Q2NKJ3 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CTC1Q2NKJ3 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CTC1Q2NKJ3 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CTC1Q2NKJ3 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CTC1Q2NKJ3 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC21.12■□□□□ 0.97
CTC1Q2NKJ3 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC21.12■□□□□ 0.97
CTC1Q2NKJ3 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC21.12■□□□□ 0.97
CTC1Q2NKJ3 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC21.12■□□□□ 0.97
CTC1Q2NKJ3 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC21.12■□□□□ 0.97
CTC1Q2NKJ3 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CTC1Q2NKJ3 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
CTC1Q2NKJ3 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC21.12■□□□□ 0.97
CTC1Q2NKJ3 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC21.12■□□□□ 0.97
CTC1Q2NKJ3 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CTC1Q2NKJ3 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CTC1Q2NKJ3 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
CTC1Q2NKJ3 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CTC1Q2NKJ3 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CTC1Q2NKJ3 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC21.11■□□□□ 0.97
CTC1Q2NKJ3 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CTC1Q2NKJ3 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC21.11■□□□□ 0.97
CTC1Q2NKJ3 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CTC1Q2NKJ3 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CTC1Q2NKJ3 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CTC1Q2NKJ3 GUK1-204ENST00000366721 689 ntTSL 3 BASIC21.11■□□□□ 0.97
CTC1Q2NKJ3 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
CTC1Q2NKJ3 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CTC1Q2NKJ3 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC21.11■□□□□ 0.97
CTC1Q2NKJ3 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CTC1Q2NKJ3 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC21.11■□□□□ 0.97
CTC1Q2NKJ3 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC21.11■□□□□ 0.97
CTC1Q2NKJ3 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CTC1Q2NKJ3 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
CTC1Q2NKJ3 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CTC1Q2NKJ3 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC21.11■□□□□ 0.97
CTC1Q2NKJ3 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC21.11■□□□□ 0.97
CTC1Q2NKJ3 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CTC1Q2NKJ3 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC21.11■□□□□ 0.97
CTC1Q2NKJ3 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
CTC1Q2NKJ3 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CTC1Q2NKJ3 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
CTC1Q2NKJ3 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CTC1Q2NKJ3 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CTC1Q2NKJ3 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC21.1■□□□□ 0.97
CTC1Q2NKJ3 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CTC1Q2NKJ3 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CTC1Q2NKJ3 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CTC1Q2NKJ3 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms