Protein–RNA interactions for Protein: Q15878

CACNA1E, Voltage-dependent R-type calcium channel subunit alpha-1E, humanhuman

Predictions only

Length 2,313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1EQ15878 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CACNA1EQ15878 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.32■□□□□ 0.68
CACNA1EQ15878 AL049796.1-201ENST00000565336 1766 ntBASIC19.32■□□□□ 0.68
CACNA1EQ15878 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CACNA1EQ15878 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CACNA1EQ15878 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CACNA1EQ15878 INGX-201ENST00000359239 846 ntBASIC19.32■□□□□ 0.68
CACNA1EQ15878 AC010203.1-204ENST00000548782 407 ntBASIC19.32■□□□□ 0.68
CACNA1EQ15878 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC19.32■□□□□ 0.68
CACNA1EQ15878 AC116407.4-201ENST00000623319 1061 ntBASIC19.32■□□□□ 0.68
CACNA1EQ15878 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CACNA1EQ15878 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CACNA1EQ15878 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CACNA1EQ15878 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CACNA1EQ15878 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CACNA1EQ15878 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.32■□□□□ 0.68
CACNA1EQ15878 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
CACNA1EQ15878 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.31■□□□□ 0.68
CACNA1EQ15878 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.31■□□□□ 0.68
CACNA1EQ15878 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
CACNA1EQ15878 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CACNA1EQ15878 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CACNA1EQ15878 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CACNA1EQ15878 AP000692.2-201ENST00000608391 879 ntBASIC19.31■□□□□ 0.68
CACNA1EQ15878 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC19.31■□□□□ 0.68
CACNA1EQ15878 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CACNA1EQ15878 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CACNA1EQ15878 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CACNA1EQ15878 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CACNA1EQ15878 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.31■□□□□ 0.68
CACNA1EQ15878 COPS8-203ENST00000409334 794 ntTSL 5 BASIC19.31■□□□□ 0.68
CACNA1EQ15878 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.31■□□□□ 0.68
CACNA1EQ15878 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC19.31■□□□□ 0.68
CACNA1EQ15878 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CACNA1EQ15878 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CACNA1EQ15878 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
CACNA1EQ15878 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.31■□□□□ 0.68
CACNA1EQ15878 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CACNA1EQ15878 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CACNA1EQ15878 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CACNA1EQ15878 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CACNA1EQ15878 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.3■□□□□ 0.68
CACNA1EQ15878 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
CACNA1EQ15878 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CACNA1EQ15878 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CACNA1EQ15878 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CACNA1EQ15878 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CACNA1EQ15878 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CACNA1EQ15878 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CACNA1EQ15878 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CACNA1EQ15878 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CACNA1EQ15878 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CACNA1EQ15878 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CACNA1EQ15878 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC19.3■□□□□ 0.68
CACNA1EQ15878 AC004951.3-201ENST00000418645 1148 ntBASIC19.3■□□□□ 0.68
CACNA1EQ15878 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
CACNA1EQ15878 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CACNA1EQ15878 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC19.3■□□□□ 0.68
CACNA1EQ15878 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.3■□□□□ 0.68
CACNA1EQ15878 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.3■□□□□ 0.68
CACNA1EQ15878 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
CACNA1EQ15878 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.29■□□□□ 0.68
CACNA1EQ15878 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
CACNA1EQ15878 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CACNA1EQ15878 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CACNA1EQ15878 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.29■□□□□ 0.68
CACNA1EQ15878 Z85996.1-201ENST00000494644 937 ntBASIC19.29■□□□□ 0.68
CACNA1EQ15878 AL138966.2-201ENST00000621997 464 ntBASIC19.29■□□□□ 0.68
CACNA1EQ15878 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC19.29■□□□□ 0.68
CACNA1EQ15878 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CACNA1EQ15878 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
CACNA1EQ15878 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.29■□□□□ 0.68
CACNA1EQ15878 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.29■□□□□ 0.68
CACNA1EQ15878 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC19.29■□□□□ 0.68
CACNA1EQ15878 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.29■□□□□ 0.68
CACNA1EQ15878 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.29■□□□□ 0.68
CACNA1EQ15878 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC19.29■□□□□ 0.68
CACNA1EQ15878 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC19.29■□□□□ 0.68
CACNA1EQ15878 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.29■□□□□ 0.68
CACNA1EQ15878 FP700111.2-201ENST00000619190 1892 ntBASIC19.29■□□□□ 0.68
CACNA1EQ15878 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
CACNA1EQ15878 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.28■□□□□ 0.68
CACNA1EQ15878 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19.28■□□□□ 0.68
CACNA1EQ15878 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CACNA1EQ15878 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.28■□□□□ 0.68
CACNA1EQ15878 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CACNA1EQ15878 AC128688.1-201ENST00000487626 519 ntBASIC19.28■□□□□ 0.68
CACNA1EQ15878 CLN6-204ENST00000564752 900 ntTSL 3 BASIC19.28■□□□□ 0.68
CACNA1EQ15878 AP000550.4-202ENST00000639755 178 ntBASIC19.28■□□□□ 0.68
CACNA1EQ15878 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CACNA1EQ15878 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.28■□□□□ 0.68
CACNA1EQ15878 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CACNA1EQ15878 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CACNA1EQ15878 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CACNA1EQ15878 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
CACNA1EQ15878 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CACNA1EQ15878 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CACNA1EQ15878 AC006128.1-201ENST00000624704 1661 ntBASIC19.28■□□□□ 0.68
CACNA1EQ15878 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CACNA1EQ15878 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms