Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDKL1Q00532 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDKL1Q00532 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.42■□□□□ 0.7
CDKL1Q00532 AP000974.1-201ENST00000623909 2387 ntBASIC19.42■□□□□ 0.7
CDKL1Q00532 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDKL1Q00532 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
CDKL1Q00532 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CDKL1Q00532 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CDKL1Q00532 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDKL1Q00532 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.41■□□□□ 0.7
CDKL1Q00532 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDKL1Q00532 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
CDKL1Q00532 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
CDKL1Q00532 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.41■□□□□ 0.7
CDKL1Q00532 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDKL1Q00532 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDKL1Q00532 SLC29A4P1-201ENST00000398760 971 ntBASIC19.41■□□□□ 0.7
CDKL1Q00532 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CDKL1Q00532 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC19.41■□□□□ 0.7
CDKL1Q00532 AC092666.2-201ENST00000613287 246 ntBASIC19.41■□□□□ 0.7
CDKL1Q00532 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC19.41■□□□□ 0.7
CDKL1Q00532 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.41■□□□□ 0.7
CDKL1Q00532 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDKL1Q00532 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDKL1Q00532 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDKL1Q00532 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDKL1Q00532 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.41■□□□□ 0.7
CDKL1Q00532 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDKL1Q00532 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDKL1Q00532 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CDKL1Q00532 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.4■□□□□ 0.7
CDKL1Q00532 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CDKL1Q00532 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CDKL1Q00532 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.4■□□□□ 0.7
CDKL1Q00532 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDKL1Q00532 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CDKL1Q00532 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDKL1Q00532 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19.4■□□□□ 0.7
CDKL1Q00532 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CDKL1Q00532 MAP2K4P1-201ENST00000438453 1195 ntBASIC19.4■□□□□ 0.7
CDKL1Q00532 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CDKL1Q00532 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.4■□□□□ 0.7
CDKL1Q00532 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDKL1Q00532 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDKL1Q00532 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CDKL1Q00532 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.4■□□□□ 0.7
CDKL1Q00532 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.4■□□□□ 0.7
CDKL1Q00532 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDKL1Q00532 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDKL1Q00532 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CDKL1Q00532 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDKL1Q00532 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CDKL1Q00532 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.39■□□□□ 0.7
CDKL1Q00532 AC004408.2-201ENST00000623613 2777 ntBASIC19.39■□□□□ 0.7
CDKL1Q00532 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.39■□□□□ 0.7
CDKL1Q00532 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDKL1Q00532 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CDKL1Q00532 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDKL1Q00532 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDKL1Q00532 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDKL1Q00532 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDKL1Q00532 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC19.39■□□□□ 0.69
CDKL1Q00532 AC073210.2-201ENST00000430369 194 ntBASIC19.39■□□□□ 0.69
CDKL1Q00532 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19.39■□□□□ 0.69
CDKL1Q00532 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDKL1Q00532 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.39■□□□□ 0.69
CDKL1Q00532 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.39■□□□□ 0.69
CDKL1Q00532 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19.39■□□□□ 0.69
CDKL1Q00532 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDKL1Q00532 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.39■□□□□ 0.69
CDKL1Q00532 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.39■□□□□ 0.69
CDKL1Q00532 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CDKL1Q00532 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDKL1Q00532 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDKL1Q00532 AP001271.2-201ENST00000624018 1556 ntBASIC19.39■□□□□ 0.69
CDKL1Q00532 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.39■□□□□ 0.69
CDKL1Q00532 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDKL1Q00532 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.39■□□□□ 0.69
CDKL1Q00532 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CDKL1Q00532 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.39■□□□□ 0.69
CDKL1Q00532 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
CDKL1Q00532 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDKL1Q00532 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.39■□□□□ 0.69
CDKL1Q00532 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.39■□□□□ 0.69
CDKL1Q00532 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDKL1Q00532 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDKL1Q00532 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDKL1Q00532 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDKL1Q00532 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDKL1Q00532 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDKL1Q00532 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CDKL1Q00532 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDKL1Q00532 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
CDKL1Q00532 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CDKL1Q00532 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.38■□□□□ 0.69
CDKL1Q00532 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CDKL1Q00532 DUSP5P2-201ENST00000426873 1033 ntBASIC19.38■□□□□ 0.69
CDKL1Q00532 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC19.38■□□□□ 0.69
CDKL1Q00532 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.38■□□□□ 0.69
CDKL1Q00532 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms