Protein–RNA interactions for Protein: P78539

SRPX, Sushi repeat-containing protein SRPX, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPXP78539 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SRPXP78539 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SRPXP78539 SLC7A5P2-201ENST00000553010 536 ntBASIC16.28■□□□□ 0.2
SRPXP78539 AL356652.1-201ENST00000615962 565 ntBASIC16.28■□□□□ 0.2
SRPXP78539 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SRPXP78539 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC16.28■□□□□ 0.2
SRPXP78539 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SRPXP78539 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
SRPXP78539 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SRPXP78539 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SRPXP78539 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SRPXP78539 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
SRPXP78539 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SRPXP78539 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SRPXP78539 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SRPXP78539 RBM17P2-201ENST00000616397 1405 ntBASIC16.28■□□□□ 0.2
SRPXP78539 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SRPXP78539 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SRPXP78539 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SRPXP78539 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SRPXP78539 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
SRPXP78539 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC16.27■□□□□ 0.2
SRPXP78539 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SRPXP78539 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SRPXP78539 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
SRPXP78539 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SRPXP78539 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SRPXP78539 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SRPXP78539 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SRPXP78539 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC16.27■□□□□ 0.2
SRPXP78539 MAG-206ENST00000597035 542 ntTSL 4 BASIC16.27■□□□□ 0.2
SRPXP78539 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
SRPXP78539 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC16.27■□□□□ 0.2
SRPXP78539 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SRPXP78539 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC16.27■□□□□ 0.19
SRPXP78539 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC16.27■□□□□ 0.19
SRPXP78539 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC16.27■□□□□ 0.19
SRPXP78539 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SRPXP78539 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SRPXP78539 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SRPXP78539 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SRPXP78539 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SRPXP78539 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SRPXP78539 AC087633.2-202ENST00000565166 1439 ntBASIC16.27■□□□□ 0.19
SRPXP78539 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC16.27■□□□□ 0.19
SRPXP78539 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SRPXP78539 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SRPXP78539 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SRPXP78539 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SRPXP78539 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SRPXP78539 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SRPXP78539 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
SRPXP78539 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC16.26■□□□□ 0.19
SRPXP78539 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
SRPXP78539 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SRPXP78539 IRS3P-201ENST00000223076 1006 ntBASIC16.26■□□□□ 0.19
SRPXP78539 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC16.26■□□□□ 0.19
SRPXP78539 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC16.26■□□□□ 0.19
SRPXP78539 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC16.26■□□□□ 0.19
SRPXP78539 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC16.26■□□□□ 0.19
SRPXP78539 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC16.26■□□□□ 0.19
SRPXP78539 AP001160.3-201ENST00000601484 763 ntBASIC16.26■□□□□ 0.19
SRPXP78539 AC079598.2-202ENST00000546624 1451 ntBASIC16.26■□□□□ 0.19
SRPXP78539 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC16.26■□□□□ 0.19
SRPXP78539 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
SRPXP78539 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SRPXP78539 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SRPXP78539 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC16.26■□□□□ 0.19
SRPXP78539 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SRPXP78539 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC16.26■□□□□ 0.19
SRPXP78539 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SRPXP78539 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SRPXP78539 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SRPXP78539 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SRPXP78539 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SRPXP78539 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
SRPXP78539 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
SRPXP78539 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC16.25■□□□□ 0.19
SRPXP78539 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC16.25■□□□□ 0.19
SRPXP78539 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
SRPXP78539 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SRPXP78539 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SRPXP78539 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
SRPXP78539 MIR939-201ENST00000401314 82 ntBASIC16.25■□□□□ 0.19
SRPXP78539 PBX2P1-201ENST00000493219 1291 ntBASIC16.25■□□□□ 0.19
SRPXP78539 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC16.25■□□□□ 0.19
SRPXP78539 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SRPXP78539 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC16.25■□□□□ 0.19
SRPXP78539 SLC7A5P1-201ENST00000568957 537 ntBASIC16.25■□□□□ 0.19
SRPXP78539 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC16.25■□□□□ 0.19
SRPXP78539 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC16.25■□□□□ 0.19
SRPXP78539 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SRPXP78539 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
SRPXP78539 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SRPXP78539 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC16.25■□□□□ 0.19
SRPXP78539 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SRPXP78539 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
SRPXP78539 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SRPXP78539 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SRPXP78539 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms