Protein–RNA interactions for Protein: P54253

ATXN1, Ataxin-1, humanhuman

Known RBP Predictions only

Length 815 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN1P54253 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.76■□□□□ 0.91
ATXN1P54253 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.76■□□□□ 0.91
ATXN1P54253 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATXN1P54253 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.76■□□□□ 0.91
ATXN1P54253 WDR88-203ENST00000592765 651 ntTSL 5 BASIC20.76■□□□□ 0.91
ATXN1P54253 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC20.76■□□□□ 0.91
ATXN1P54253 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATXN1P54253 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.76■□□□□ 0.91
ATXN1P54253 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATXN1P54253 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATXN1P54253 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATXN1P54253 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATXN1P54253 KRT17P2-201ENST00000300992 1314 ntBASIC20.76■□□□□ 0.91
ATXN1P54253 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.76■□□□□ 0.91
ATXN1P54253 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
ATXN1P54253 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
ATXN1P54253 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.75■□□□□ 0.91
ATXN1P54253 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATXN1P54253 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATXN1P54253 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ATXN1P54253 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATXN1P54253 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.75■□□□□ 0.91
ATXN1P54253 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATXN1P54253 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ATXN1P54253 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATXN1P54253 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC20.75■□□□□ 0.91
ATXN1P54253 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
ATXN1P54253 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC20.75■□□□□ 0.91
ATXN1P54253 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATXN1P54253 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.75■□□□□ 0.91
ATXN1P54253 SOX15-203ENST00000570788 1093 ntBASIC20.75■□□□□ 0.91
ATXN1P54253 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ATXN1P54253 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ATXN1P54253 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.75■□□□□ 0.91
ATXN1P54253 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ATXN1P54253 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
ATXN1P54253 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.75■□□□□ 0.91
ATXN1P54253 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.75■□□□□ 0.91
ATXN1P54253 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.74■□□□□ 0.91
ATXN1P54253 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATXN1P54253 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.74■□□□□ 0.91
ATXN1P54253 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ATXN1P54253 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.74■□□□□ 0.91
ATXN1P54253 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ATXN1P54253 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ATXN1P54253 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.74■□□□□ 0.91
ATXN1P54253 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ATXN1P54253 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATXN1P54253 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
ATXN1P54253 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.74■□□□□ 0.91
ATXN1P54253 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC20.74■□□□□ 0.91
ATXN1P54253 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.74■□□□□ 0.91
ATXN1P54253 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.74■□□□□ 0.91
ATXN1P54253 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ATXN1P54253 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ATXN1P54253 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ATXN1P54253 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.74■□□□□ 0.91
ATXN1P54253 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
ATXN1P54253 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATXN1P54253 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.74■□□□□ 0.91
ATXN1P54253 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATXN1P54253 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATXN1P54253 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
ATXN1P54253 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATXN1P54253 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATXN1P54253 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ATXN1P54253 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ATXN1P54253 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ATXN1P54253 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.73■□□□□ 0.91
ATXN1P54253 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATXN1P54253 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATXN1P54253 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATXN1P54253 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ATXN1P54253 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATXN1P54253 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ATXN1P54253 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC20.73■□□□□ 0.91
ATXN1P54253 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.73■□□□□ 0.91
ATXN1P54253 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC20.73■□□□□ 0.91
ATXN1P54253 AL390719.1-204ENST00000412397 1219 ntBASIC20.73■□□□□ 0.91
ATXN1P54253 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.73■□□□□ 0.91
ATXN1P54253 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
ATXN1P54253 KRT17P3-201ENST00000420566 1262 ntBASIC20.73■□□□□ 0.91
ATXN1P54253 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC20.73■□□□□ 0.91
ATXN1P54253 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC20.73■□□□□ 0.91
ATXN1P54253 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.73■□□□□ 0.91
ATXN1P54253 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.73■□□□□ 0.91
ATXN1P54253 PPOX-219ENST00000544598 813 ntTSL 2 BASIC20.73■□□□□ 0.91
ATXN1P54253 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.73■□□□□ 0.91
ATXN1P54253 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.73■□□□□ 0.91
ATXN1P54253 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.73■□□□□ 0.91
ATXN1P54253 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
ATXN1P54253 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ATXN1P54253 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
ATXN1P54253 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ATXN1P54253 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.72■□□□□ 0.91
ATXN1P54253 KRT16P6-202ENST00000425692 1426 ntBASIC20.72■□□□□ 0.91
ATXN1P54253 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ATXN1P54253 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ATXN1P54253 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ATXN1P54253 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms