Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GTF2A1P52655 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GTF2A1P52655 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GTF2A1P52655 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GTF2A1P52655 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
GTF2A1P52655 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
GTF2A1P52655 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GTF2A1P52655 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC19.37■□□□□ 0.69
GTF2A1P52655 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
GTF2A1P52655 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
GTF2A1P52655 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GTF2A1P52655 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GTF2A1P52655 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
GTF2A1P52655 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GTF2A1P52655 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
GTF2A1P52655 AL354751.1-201ENST00000412768 1863 ntBASIC19.37■□□□□ 0.69
GTF2A1P52655 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
GTF2A1P52655 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
GTF2A1P52655 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
GTF2A1P52655 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
GTF2A1P52655 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
GTF2A1P52655 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GTF2A1P52655 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
GTF2A1P52655 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
GTF2A1P52655 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
GTF2A1P52655 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
GTF2A1P52655 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.36■□□□□ 0.69
GTF2A1P52655 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GTF2A1P52655 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
GTF2A1P52655 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GTF2A1P52655 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GTF2A1P52655 AC004987.1-201ENST00000428627 508 ntBASIC19.36■□□□□ 0.69
GTF2A1P52655 NTF6A-201ENST00000591175 560 ntBASIC19.36■□□□□ 0.69
GTF2A1P52655 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
GTF2A1P52655 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GTF2A1P52655 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
GTF2A1P52655 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC19.36■□□□□ 0.69
GTF2A1P52655 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
GTF2A1P52655 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
GTF2A1P52655 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC19.36■□□□□ 0.69
GTF2A1P52655 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
GTF2A1P52655 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.36■□□□□ 0.69
GTF2A1P52655 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
GTF2A1P52655 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
GTF2A1P52655 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.36■□□□□ 0.69
GTF2A1P52655 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC19.36■□□□□ 0.69
GTF2A1P52655 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
GTF2A1P52655 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
GTF2A1P52655 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.35■□□□□ 0.69
GTF2A1P52655 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
GTF2A1P52655 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
GTF2A1P52655 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GTF2A1P52655 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.35■□□□□ 0.69
GTF2A1P52655 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC19.35■□□□□ 0.69
GTF2A1P52655 AC074183.2-201ENST00000623112 922 ntBASIC19.35■□□□□ 0.69
GTF2A1P52655 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC19.35■□□□□ 0.69
GTF2A1P52655 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
GTF2A1P52655 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC19.35■□□□□ 0.69
GTF2A1P52655 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
GTF2A1P52655 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
GTF2A1P52655 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
GTF2A1P52655 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GTF2A1P52655 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
GTF2A1P52655 LINC01465-201ENST00000408887 1940 ntBASIC19.35■□□□□ 0.69
GTF2A1P52655 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GTF2A1P52655 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GTF2A1P52655 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
GTF2A1P52655 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
GTF2A1P52655 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
GTF2A1P52655 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC19.34■□□□□ 0.69
GTF2A1P52655 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GTF2A1P52655 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
GTF2A1P52655 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GTF2A1P52655 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GTF2A1P52655 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.34■□□□□ 0.69
GTF2A1P52655 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GTF2A1P52655 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
GTF2A1P52655 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GTF2A1P52655 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
GTF2A1P52655 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GTF2A1P52655 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC19.34■□□□□ 0.69
GTF2A1P52655 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC19.34■□□□□ 0.69
GTF2A1P52655 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.34■□□□□ 0.69
GTF2A1P52655 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GTF2A1P52655 ATP5G2P3-201ENST00000429083 425 ntBASIC19.34■□□□□ 0.69
GTF2A1P52655 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC19.34■□□□□ 0.69
GTF2A1P52655 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.34■□□□□ 0.69
GTF2A1P52655 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
GTF2A1P52655 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GTF2A1P52655 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.34■□□□□ 0.69
GTF2A1P52655 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GTF2A1P52655 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GTF2A1P52655 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
GTF2A1P52655 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
GTF2A1P52655 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.33■□□□□ 0.69
GTF2A1P52655 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
GTF2A1P52655 CROCCP3-202ENST00000420820 1947 ntBASIC19.33■□□□□ 0.69
GTF2A1P52655 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
GTF2A1P52655 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
GTF2A1P52655 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC19.33■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms