Protein–RNA interactions for Protein: P52298

NCBP2, Nuclear cap-binding protein subunit 2, humanhuman

Known RBP eCLIP

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2P52298 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.081e-10■■■□□ 14.8
NCBP2P52298 NEK9-209ENST00000556170 3975 ntTSL 514.24□□□□□ -0.131e-10■■■□□ 14.8
NCBP2P52298 FOXRED1-205ENST00000526366 553 ntTSL 414.13□□□□□ -0.151e-10■■■□□ 14.8
NCBP2P52298 FOXRED1-202ENST00000524751 895 ntTSL 314.13□□□□□ -0.151e-10■■■□□ 14.8
NCBP2P52298 FOXRED1-212ENST00000532101 1030 ntTSL 513.74□□□□□ -0.211e-10■■■□□ 14.8
NCBP2P52298 RABGGTA-212ENST00000559974 1963 ntTSL 513.67□□□□□ -0.221e-10■■■□□ 14.8
NCBP2P52298 RABGGTA-209ENST00000559551 2060 ntTSL 513.44□□□□□ -0.261e-10■■■□□ 14.8
NCBP2P52298 FOXRED1-204ENST00000525770 1427 ntTSL 213.3□□□□□ -0.281e-10■■■□□ 14.8
NCBP2P52298 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.321e-10■■■□□ 14.8
NCBP2P52298 FOXRED1-209ENST00000529802 580 ntTSL 213.03□□□□□ -0.321e-10■■■□□ 14.8
NCBP2P52298 FOXRED1-217ENST00000534011 1955 ntTSL 213.02□□□□□ -0.321e-10■■■□□ 14.8
NCBP2P52298 RABGGTA-220ENST00000560998 1997 ntTSL 512.9□□□□□ -0.341e-10■■■□□ 14.8
NCBP2P52298 RABGGTA-213ENST00000560127 573 ntTSL 411.25□□□□□ -0.611e-10■■■□□ 14.8
NCBP2P52298 RABGGTA-215ENST00000560207 678 ntTSL 311.22□□□□□ -0.611e-10■■■□□ 14.8
NCBP2P52298 NEK9-202ENST00000553823 577 ntTSL 511.06□□□□□ -0.641e-10■■■□□ 14.8
NCBP2P52298 RABGGTA-204ENST00000558376 1883 ntTSL 510.25□□□□□ -0.771e-10■■■□□ 14.8
NCBP2P52298 FOXRED1-216ENST00000533839 559 ntTSL 48.83□□□□□ -11e-10■■■□□ 14.8
NCBP2P52298 PKDCC-202ENST00000401498 1550 ntTSL 527.96■■■□□ 2.079e-7■■■□□ 14.8
NCBP2P52298 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.229e-7■■■□□ 14.8
NCBP2P52298 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.172e-9■■■□□ 14.8
NCBP2P52298 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.84■□□□□ 0.932e-9■■■□□ 14.8
NCBP2P52298 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.652e-9■■■□□ 14.8
NCBP2P52298 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.7■□□□□ 0.422e-9■■■□□ 14.8
NCBP2P52298 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.69■□□□□ 0.12e-9■■■□□ 14.8
NCBP2P52298 TGIF1-221ENST00000552383 1267 ntTSL 215.19■□□□□ 0.022e-9■■■□□ 14.8
NCBP2P52298 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC13.51□□□□□ -0.252e-9■■■□□ 14.8
NCBP2P52298 TGIF1-209ENST00000546979 554 ntTSL 311.77□□□□□ -0.532e-9■■■□□ 14.8
NCBP2P52298 TGIF1-216ENST00000550958 706 ntTSL 38.72□□□□□ -1.012e-9■■■□□ 14.8
NCBP2P52298 TGIF1-223ENST00000618001 3030 ntTSL 2 BASIC7.33□□□□□ -1.242e-9■■■□□ 14.8
NCBP2P52298 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC6.18□□□□□ -1.422e-9■■■□□ 14.8
NCBP2P52298 TGIF1-212ENST00000549253 563 ntTSL 34.67□□□□□ -1.662e-9■■■□□ 14.8
NCBP2P52298 TGIF1-215ENST00000549780 801 ntTSL 54.39□□□□□ -1.712e-9■■■□□ 14.8
NCBP2P52298 ZNF789-205ENST00000465438 4253 ntTSL 1 (best)9.1□□□□□ -0.951e-11■■■□□ 14.8
NCBP2P52298 RPS6KA1-210ENST00000525525 543 ntTSL 524.41■■□□□ 1.51e-7■■■□□ 14.8
NCBP2P52298 RPS6KA1-212ENST00000526040 500 ntTSL 524.41■■□□□ 1.51e-7■■■□□ 14.8
NCBP2P52298 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC23.17■■□□□ 1.31e-7■■■□□ 14.8
NCBP2P52298 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC22.34■■□□□ 1.171e-7■■■□□ 14.8
NCBP2P52298 AC090360.1-202ENST00000562771 1032 ntAPPRIS P5 TSL 422.34■■□□□ 1.171e-7■■■□□ 14.8
NCBP2P52298 KIF13A-211ENST00000507576 529 ntTSL 319.92■□□□□ 0.781e-7■■■□□ 14.8
NCBP2P52298 POLR3E-204ENST00000561494 575 ntTSL 319.9■□□□□ 0.782e-14■■■□□ 14.8
NCBP2P52298 RBFA-203ENST00000586847 566 ntTSL 419.88■□□□□ 0.771e-7■■■□□ 14.8
NCBP2P52298 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.756e-6■■■□□ 14.8
NCBP2P52298 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.721e-7■■■□□ 14.8
NCBP2P52298 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.651e-7■■■□□ 14.8
NCBP2P52298 AKAP1-215ENST00000575186 578 ntTSL 418.97■□□□□ 0.631e-7■■■□□ 14.8
NCBP2P52298 HOOK1-202ENST00000455990 519 ntTSL 418.93■□□□□ 0.621e-7■■■□□ 14.8
NCBP2P52298 POLR3E-214ENST00000565358 565 ntTSL 418.01■□□□□ 0.472e-14■■■□□ 14.8
NCBP2P52298 POLR3E-205ENST00000563024 473 ntTSL 418.01■□□□□ 0.472e-14■■■□□ 14.8
NCBP2P52298 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.96■□□□□ 0.471e-7■■■□□ 14.8
NCBP2P52298 RBFA-204ENST00000591612 1587 nt17.79■□□□□ 0.441e-7■■■□□ 14.8
NCBP2P52298 AKAP1-205ENST00000570423 568 ntTSL 417.54■□□□□ 0.41e-7■■■□□ 14.8
NCBP2P52298 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.5■□□□□ 0.392e-14■■■□□ 14.8
NCBP2P52298 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.391e-7■■■□□ 14.8
NCBP2P52298 POLR3E-212ENST00000564883 560 ntTSL 416.54■□□□□ 0.242e-14■■■□□ 14.8
NCBP2P52298 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.12■□□□□ 0.172e-14■■■□□ 14.8
NCBP2P52298 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.161e-7■■■□□ 14.8
NCBP2P52298 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.04■□□□□ 0.162e-14■■■□□ 14.8
NCBP2P52298 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.141e-7■■■□□ 14.8
NCBP2P52298 ABCC10-203ENST00000372515 933 ntTSL 515.87■□□□□ 0.131e-7■■■□□ 14.8
NCBP2P52298 ABCC10-209ENST00000502549 478 ntTSL 315.39■□□□□ 0.051e-7■■■□□ 14.8
NCBP2P52298 AKAP1-211ENST00000573085 484 ntTSL 415.29■□□□□ 0.041e-7■■■□□ 14.8
NCBP2P52298 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.021e-7■■■□□ 14.8
NCBP2P52298 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC13.9□□□□□ -0.181e-7■■■□□ 14.8
NCBP2P52298 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.261e-7■■■□□ 14.8
NCBP2P52298 KIF13B-202ENST00000522355 2630 ntTSL 212.67□□□□□ -0.381e-7■■■□□ 14.8
NCBP2P52298 KIF13A-201ENST00000259711 5941 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.411e-7■■■□□ 14.8
NCBP2P52298 POLR3E-208ENST00000564061 4800 ntTSL 1 (best)12.14□□□□□ -0.472e-14■■■□□ 14.8
NCBP2P52298 MASTL-201ENST00000342386 2968 ntTSL 2 BASIC11.87□□□□□ -0.511e-7■■■□□ 14.8
NCBP2P52298 POLR3E-201ENST00000299853 3697 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.542e-14■■■□□ 14.8
NCBP2P52298 POLR3E-219ENST00000615879 3655 ntTSL 2 BASIC11.52□□□□□ -0.562e-14■■■□□ 14.8
NCBP2P52298 MASTL-202ENST00000375940 3080 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.61e-7■■■□□ 14.8
NCBP2P52298 AKAP1-206ENST00000571629 3105 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.631e-7■■■□□ 14.8
NCBP2P52298 KIF13B-203ENST00000522846 1965 ntTSL 210.92□□□□□ -0.661e-7■■■□□ 14.8
NCBP2P52298 TMEM184C-201ENST00000296582 4178 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.691e-7■■■□□ 14.8
NCBP2P52298 AKAP1-219ENST00000621116 4285 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.691e-7■■■□□ 14.8
NCBP2P52298 AKAP1-210ENST00000572814 532 ntTSL 410.73□□□□□ -0.691e-7■■■□□ 14.8
NCBP2P52298 KIF13B-201ENST00000521515 2765 ntTSL 5 BASIC9.63□□□□□ -0.871e-7■■■□□ 14.8
NCBP2P52298 KIF13A-204ENST00000378826 5747 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.971e-7■■■□□ 14.8
NCBP2P52298 RPS6KA1-209ENST00000524436 560 ntTSL 47.65□□□□□ -1.181e-7■■■□□ 14.8
NCBP2P52298 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.281e-7■■■□□ 14.8
NCBP2P52298 KIF13B-205ENST00000523968 1750 ntTSL 56.72□□□□□ -1.331e-7■■■□□ 14.8
NCBP2P52298 XPO1-212ENST00000457483 488 ntTSL 45.54□□□□□ -1.521e-7■■■□□ 14.8
NCBP2P52298 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.811e-7■■■□□ 14.8
NCBP2P52298 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.831e-7■■■□□ 14.8
NCBP2P52298 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC2.34□□□□□ -2.031e-7■■■□□ 14.8
NCBP2P52298 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.051e-7■■■□□ 14.8
NCBP2P52298 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.051e-7■■■□□ 14.8
NCBP2P52298 XPO1-220ENST00000481214 720 ntTSL 21.5□□□□□ -2.171e-7■■■□□ 14.8
NCBP2P52298 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.73□□□□□ -2.291e-7■■■□□ 14.8
NCBP2P52298 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.61□□□□□ -2.311e-7■■■□□ 14.8
NCBP2P52298 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.43□□□□□ -2.341e-7■■■□□ 14.8
NCBP2P52298 ENC1-203ENST00000509127 584 ntTSL 318.72■□□□□ 0.592e-16■■■□□ 14.7
NCBP2P52298 ENC1-202ENST00000508331 1405 ntTSL 418.4■□□□□ 0.542e-16■■■□□ 14.7
NCBP2P52298 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.372e-16■■■□□ 14.7
NCBP2P52298 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.8■□□□□ 0.282e-16■■■□□ 14.7
NCBP2P52298 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.262e-16■■■□□ 14.7
NCBP2P52298 HEXIM1-201ENST00000332499 3600 ntAPPRIS P1 BASIC11.92□□□□□ -0.56e-14■■■□□ 14.7
NCBP2P52298 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.433e-6■■■□□ 14.7
NCBP2P52298 UVSSA-202ENST00000389851 12605 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.873e-6■■■□□ 14.7
NCBP2P52298 OAZ1-203ENST00000586054 2832 nt18.73■□□□□ 0.591e-13■■■□□ 14.7
Retrieved 100 of 18,329 protein–RNA pairs in 125.9 ms