Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
PCP4P48539 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
PCP4P48539 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PCP4P48539 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
PCP4P48539 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC13.72□□□□□ -0.21
PCP4P48539 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
PCP4P48539 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
PCP4P48539 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC13.72□□□□□ -0.21
PCP4P48539 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
PCP4P48539 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
PCP4P48539 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC13.71□□□□□ -0.21
PCP4P48539 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
PCP4P48539 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
PCP4P48539 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
PCP4P48539 AC005332.7-201ENST00000614046 2005 ntBASIC13.71□□□□□ -0.21
PCP4P48539 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
PCP4P48539 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
PCP4P48539 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
PCP4P48539 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC13.71□□□□□ -0.21
PCP4P48539 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC13.71□□□□□ -0.21
PCP4P48539 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
PCP4P48539 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
PCP4P48539 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
PCP4P48539 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC13.71□□□□□ -0.21
PCP4P48539 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
PCP4P48539 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
PCP4P48539 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
PCP4P48539 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
PCP4P48539 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
PCP4P48539 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
PCP4P48539 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
PCP4P48539 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
PCP4P48539 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC13.71□□□□□ -0.22
PCP4P48539 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
PCP4P48539 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC13.71□□□□□ -0.22
PCP4P48539 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
PCP4P48539 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
PCP4P48539 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC13.71□□□□□ -0.22
PCP4P48539 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
PCP4P48539 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
PCP4P48539 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC13.71□□□□□ -0.22
PCP4P48539 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
PCP4P48539 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
PCP4P48539 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
PCP4P48539 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
PCP4P48539 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
PCP4P48539 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PCP4P48539 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PCP4P48539 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
PCP4P48539 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
PCP4P48539 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC13.7□□□□□ -0.22
PCP4P48539 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC13.7□□□□□ -0.22
PCP4P48539 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC13.7□□□□□ -0.22
PCP4P48539 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
PCP4P48539 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PCP4P48539 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
PCP4P48539 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PCP4P48539 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
PCP4P48539 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC13.7□□□□□ -0.22
PCP4P48539 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
PCP4P48539 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PCP4P48539 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
PCP4P48539 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PCP4P48539 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PCP4P48539 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PCP4P48539 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC13.7□□□□□ -0.22
PCP4P48539 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
PCP4P48539 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
PCP4P48539 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PCP4P48539 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
PCP4P48539 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PCP4P48539 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC13.7□□□□□ -0.22
PCP4P48539 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC13.7□□□□□ -0.22
PCP4P48539 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PCP4P48539 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC13.7□□□□□ -0.22
PCP4P48539 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
PCP4P48539 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PCP4P48539 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
PCP4P48539 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
PCP4P48539 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PCP4P48539 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
PCP4P48539 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
PCP4P48539 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PCP4P48539 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PCP4P48539 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC13.69□□□□□ -0.22
PCP4P48539 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
PCP4P48539 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PCP4P48539 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
PCP4P48539 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC13.69□□□□□ -0.22
PCP4P48539 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PCP4P48539 TK2-221ENST00000620035 5060 ntTSL 2 BASIC13.69□□□□□ -0.22
PCP4P48539 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
PCP4P48539 AC080080.1-201ENST00000625121 2420 ntBASIC13.69□□□□□ -0.22
PCP4P48539 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PCP4P48539 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
PCP4P48539 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC13.69□□□□□ -0.22
PCP4P48539 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PCP4P48539 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PCP4P48539 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PCP4P48539 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms