Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.76■□□□□ 0.75
CXCL12P48061 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC19.76■□□□□ 0.75
CXCL12P48061 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CXCL12P48061 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CXCL12P48061 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
CXCL12P48061 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CXCL12P48061 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC19.75■□□□□ 0.75
CXCL12P48061 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CXCL12P48061 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.75■□□□□ 0.75
CXCL12P48061 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.75■□□□□ 0.75
CXCL12P48061 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC19.75■□□□□ 0.75
CXCL12P48061 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC19.75■□□□□ 0.75
CXCL12P48061 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC19.75■□□□□ 0.75
CXCL12P48061 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC19.75■□□□□ 0.75
CXCL12P48061 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC19.75■□□□□ 0.75
CXCL12P48061 AC011558.1-201ENST00000623459 338 ntBASIC19.75■□□□□ 0.75
CXCL12P48061 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CXCL12P48061 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CXCL12P48061 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC19.75■□□□□ 0.75
CXCL12P48061 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CXCL12P48061 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CXCL12P48061 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CXCL12P48061 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CXCL12P48061 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CXCL12P48061 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.74■□□□□ 0.75
CXCL12P48061 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CXCL12P48061 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.74■□□□□ 0.75
CXCL12P48061 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
CXCL12P48061 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CXCL12P48061 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
CXCL12P48061 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
CXCL12P48061 FAM86EP-206ENST00000510506 987 ntBASIC19.74■□□□□ 0.75
CXCL12P48061 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.74■□□□□ 0.75
CXCL12P48061 AL512604.3-201ENST00000569583 964 ntBASIC19.74■□□□□ 0.75
CXCL12P48061 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC19.74■□□□□ 0.75
CXCL12P48061 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC19.74■□□□□ 0.75
CXCL12P48061 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CXCL12P48061 AL024507.2-201ENST00000606070 2574 ntBASIC19.74■□□□□ 0.75
CXCL12P48061 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CXCL12P48061 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CXCL12P48061 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CXCL12P48061 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.73■□□□□ 0.75
CXCL12P48061 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CXCL12P48061 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.73■□□□□ 0.75
CXCL12P48061 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CXCL12P48061 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CXCL12P48061 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CXCL12P48061 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CXCL12P48061 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CXCL12P48061 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.73■□□□□ 0.75
CXCL12P48061 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CXCL12P48061 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC19.73■□□□□ 0.75
CXCL12P48061 IPPK-202ENST00000375522 882 ntTSL 3 BASIC19.73■□□□□ 0.75
CXCL12P48061 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC19.73■□□□□ 0.75
CXCL12P48061 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.73■□□□□ 0.75
CXCL12P48061 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CXCL12P48061 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC19.73■□□□□ 0.75
CXCL12P48061 HLA-A-209ENST00000638375 975 ntBASIC19.73■□□□□ 0.75
CXCL12P48061 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC19.73■□□□□ 0.75
CXCL12P48061 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC19.73■□□□□ 0.75
CXCL12P48061 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CXCL12P48061 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CXCL12P48061 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
CXCL12P48061 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CXCL12P48061 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CXCL12P48061 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CXCL12P48061 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CXCL12P48061 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CXCL12P48061 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CXCL12P48061 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CXCL12P48061 IER3-202ENST00000376377 1350 ntBASIC19.72■□□□□ 0.75
CXCL12P48061 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.72■□□□□ 0.75
CXCL12P48061 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
CXCL12P48061 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CXCL12P48061 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CXCL12P48061 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CXCL12P48061 ANKRD20A18P-201ENST00000359341 492 ntBASIC19.72■□□□□ 0.75
CXCL12P48061 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CXCL12P48061 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
CXCL12P48061 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CXCL12P48061 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC19.72■□□□□ 0.75
CXCL12P48061 TSPY17P-201ENST00000450329 467 ntBASIC19.72■□□□□ 0.75
CXCL12P48061 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CXCL12P48061 HOMER2P1-201ENST00000455653 964 ntBASIC19.72■□□□□ 0.75
CXCL12P48061 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CXCL12P48061 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.72■□□□□ 0.75
CXCL12P48061 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC19.72■□□□□ 0.75
CXCL12P48061 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CXCL12P48061 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC19.72■□□□□ 0.75
CXCL12P48061 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC19.72■□□□□ 0.75
CXCL12P48061 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.72■□□□□ 0.75
CXCL12P48061 AC092338.2-201ENST00000568827 1415 ntBASIC19.72■□□□□ 0.75
CXCL12P48061 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.72■□□□□ 0.75
CXCL12P48061 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CXCL12P48061 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CXCL12P48061 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CXCL12P48061 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.72■□□□□ 0.75
CXCL12P48061 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CXCL12P48061 DPP3P2-201ENST00000416030 1696 ntBASIC19.71■□□□□ 0.75
CXCL12P48061 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms