Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCNFP41002 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCNFP41002 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
CCNFP41002 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCNFP41002 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CCNFP41002 GPX1P1-201ENST00000388829 606 ntBASIC19.85■□□□□ 0.77
CCNFP41002 METTL15-202ENST00000403099 795 ntTSL 5 BASIC19.85■□□□□ 0.77
CCNFP41002 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.85■□□□□ 0.77
CCNFP41002 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.85■□□□□ 0.77
CCNFP41002 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
CCNFP41002 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.85■□□□□ 0.77
CCNFP41002 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.85■□□□□ 0.77
CCNFP41002 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCNFP41002 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.85■□□□□ 0.77
CCNFP41002 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
CCNFP41002 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.85■□□□□ 0.77
CCNFP41002 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCNFP41002 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.85■□□□□ 0.77
CCNFP41002 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.84■□□□□ 0.77
CCNFP41002 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCNFP41002 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCNFP41002 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCNFP41002 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCNFP41002 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.84■□□□□ 0.77
CCNFP41002 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCNFP41002 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.84■□□□□ 0.77
CCNFP41002 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.84■□□□□ 0.77
CCNFP41002 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCNFP41002 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC19.84■□□□□ 0.77
CCNFP41002 AL589743.5-201ENST00000616611 1050 ntBASIC19.84■□□□□ 0.77
CCNFP41002 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCNFP41002 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.84■□□□□ 0.77
CCNFP41002 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.84■□□□□ 0.77
CCNFP41002 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCNFP41002 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.84■□□□□ 0.77
CCNFP41002 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCNFP41002 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CCNFP41002 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.84■□□□□ 0.77
CCNFP41002 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CCNFP41002 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCNFP41002 AC004408.2-201ENST00000623613 2777 ntBASIC19.83■□□□□ 0.77
CCNFP41002 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
CCNFP41002 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
CCNFP41002 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
CCNFP41002 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
CCNFP41002 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCNFP41002 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
CCNFP41002 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCNFP41002 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCNFP41002 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.83■□□□□ 0.77
CCNFP41002 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CCNFP41002 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC19.83■□□□□ 0.77
CCNFP41002 SLC29A4P1-201ENST00000398760 971 ntBASIC19.83■□□□□ 0.77
CCNFP41002 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.83■□□□□ 0.77
CCNFP41002 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC19.83■□□□□ 0.77
CCNFP41002 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC19.83■□□□□ 0.77
CCNFP41002 AC105020.6-201ENST00000621523 1217 ntBASIC19.83■□□□□ 0.77
CCNFP41002 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCNFP41002 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.83■□□□□ 0.76
CCNFP41002 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCNFP41002 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.83■□□□□ 0.76
CCNFP41002 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCNFP41002 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCNFP41002 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CCNFP41002 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.83■□□□□ 0.76
CCNFP41002 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CCNFP41002 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
CCNFP41002 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.83■□□□□ 0.76
CCNFP41002 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCNFP41002 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCNFP41002 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCNFP41002 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCNFP41002 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.82■□□□□ 0.76
CCNFP41002 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CCNFP41002 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCNFP41002 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
CCNFP41002 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
CCNFP41002 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CCNFP41002 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.82■□□□□ 0.76
CCNFP41002 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC19.82■□□□□ 0.76
CCNFP41002 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.82■□□□□ 0.76
CCNFP41002 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.82■□□□□ 0.76
CCNFP41002 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.82■□□□□ 0.76
CCNFP41002 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.82■□□□□ 0.76
CCNFP41002 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.82■□□□□ 0.76
CCNFP41002 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CCNFP41002 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCNFP41002 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCNFP41002 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCNFP41002 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.81■□□□□ 0.76
CCNFP41002 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCNFP41002 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.81■□□□□ 0.76
CCNFP41002 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCNFP41002 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.81■□□□□ 0.76
CCNFP41002 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCNFP41002 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCNFP41002 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CCNFP41002 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCNFP41002 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCNFP41002 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms