Protein–RNA interactions for Protein: P38936

CDKN1A, Cyclin-dependent kinase inhibitor 1, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1AP38936 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
CDKN1AP38936 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC16.87■□□□□ 0.29
CDKN1AP38936 CALM3-202ENST00000391918 702 ntTSL 2 BASIC16.87■□□□□ 0.29
CDKN1AP38936 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDKN1AP38936 RBM17P1-201ENST00000453646 1190 ntBASIC16.87■□□□□ 0.29
CDKN1AP38936 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC16.87■□□□□ 0.29
CDKN1AP38936 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC16.87■□□□□ 0.29
CDKN1AP38936 NUDT16P1-203ENST00000513809 620 ntBASIC16.87■□□□□ 0.29
CDKN1AP38936 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC16.87■□□□□ 0.29
CDKN1AP38936 REXO1L10P-201ENST00000615707 1290 ntBASIC16.87■□□□□ 0.29
CDKN1AP38936 MIR6786-201ENST00000616843 113 ntBASIC16.87■□□□□ 0.29
CDKN1AP38936 CR392000.1-201ENST00000624770 1228 ntBASIC16.87■□□□□ 0.29
CDKN1AP38936 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
CDKN1AP38936 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
CDKN1AP38936 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDKN1AP38936 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDKN1AP38936 ERF-202ENST00000440177 2032 ntTSL 2 BASIC16.87■□□□□ 0.29
CDKN1AP38936 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDKN1AP38936 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDKN1AP38936 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC16.87■□□□□ 0.29
CDKN1AP38936 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC16.87■□□□□ 0.29
CDKN1AP38936 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDKN1AP38936 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDKN1AP38936 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDKN1AP38936 KRT8P17-201ENST00000453110 1448 ntBASIC16.87■□□□□ 0.29
CDKN1AP38936 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDKN1AP38936 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
CDKN1AP38936 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDKN1AP38936 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC16.86■□□□□ 0.29
CDKN1AP38936 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDKN1AP38936 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC16.86■□□□□ 0.29
CDKN1AP38936 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CDKN1AP38936 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC16.86■□□□□ 0.29
CDKN1AP38936 TK2-213ENST00000563369 882 ntTSL 5 BASIC16.86■□□□□ 0.29
CDKN1AP38936 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDKN1AP38936 AP000525.1-201ENST00000608286 694 ntBASIC16.86■□□□□ 0.29
CDKN1AP38936 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC16.86■□□□□ 0.29
CDKN1AP38936 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CDKN1AP38936 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDKN1AP38936 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CDKN1AP38936 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC16.86■□□□□ 0.29
CDKN1AP38936 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDKN1AP38936 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDKN1AP38936 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC16.86■□□□□ 0.29
CDKN1AP38936 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDKN1AP38936 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC16.86■□□□□ 0.29
CDKN1AP38936 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC16.86■□□□□ 0.29
CDKN1AP38936 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDKN1AP38936 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC16.85■□□□□ 0.29
CDKN1AP38936 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC16.85■□□□□ 0.29
CDKN1AP38936 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDKN1AP38936 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC16.85■□□□□ 0.29
CDKN1AP38936 DPP3P2-201ENST00000416030 1696 ntBASIC16.85■□□□□ 0.29
CDKN1AP38936 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDKN1AP38936 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC16.85■□□□□ 0.29
CDKN1AP38936 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC16.85■□□□□ 0.29
CDKN1AP38936 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC16.85■□□□□ 0.29
CDKN1AP38936 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDKN1AP38936 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CDKN1AP38936 UNC93B2-201ENST00000285383 730 ntBASIC16.85■□□□□ 0.29
CDKN1AP38936 MIR1238-201ENST00000408483 83 ntBASIC16.85■□□□□ 0.29
CDKN1AP38936 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC16.85■□□□□ 0.29
CDKN1AP38936 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CDKN1AP38936 RN7SL850P-201ENST00000579959 291 ntBASIC16.85■□□□□ 0.29
CDKN1AP38936 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDKN1AP38936 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
CDKN1AP38936 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC16.85■□□□□ 0.29
CDKN1AP38936 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDKN1AP38936 AC079598.2-202ENST00000546624 1451 ntBASIC16.85■□□□□ 0.29
CDKN1AP38936 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDKN1AP38936 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC16.85■□□□□ 0.29
CDKN1AP38936 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC16.84■□□□□ 0.29
CDKN1AP38936 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDKN1AP38936 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDKN1AP38936 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CDKN1AP38936 AC005229.4-201ENST00000610085 2198 ntBASIC16.84■□□□□ 0.29
CDKN1AP38936 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC16.84■□□□□ 0.29
CDKN1AP38936 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDKN1AP38936 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDKN1AP38936 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDKN1AP38936 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDKN1AP38936 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDKN1AP38936 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDKN1AP38936 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC16.84■□□□□ 0.29
CDKN1AP38936 TMPOP1-202ENST00000424642 1267 ntBASIC16.84■□□□□ 0.29
CDKN1AP38936 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC16.84■□□□□ 0.29
CDKN1AP38936 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC16.84■□□□□ 0.29
CDKN1AP38936 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC16.84■□□□□ 0.29
CDKN1AP38936 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDKN1AP38936 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC16.84■□□□□ 0.29
CDKN1AP38936 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC16.84■□□□□ 0.29
CDKN1AP38936 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
CDKN1AP38936 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDKN1AP38936 KRT8P9-201ENST00000558927 1449 ntBASIC16.84■□□□□ 0.29
CDKN1AP38936 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC16.84■□□□□ 0.29
CDKN1AP38936 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDKN1AP38936 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CDKN1AP38936 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDKN1AP38936 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.29
CDKN1AP38936 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms