Protein–RNA interactions for Protein: P28566

HTR1E, 5-hydroxytryptamine receptor 1E, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1EP28566 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HTR1EP28566 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HTR1EP28566 KRT18P20-201ENST00000548986 1279 ntBASIC18.88■□□□□ 0.61
HTR1EP28566 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC18.88■□□□□ 0.61
HTR1EP28566 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC18.88■□□□□ 0.61
HTR1EP28566 AC243732.1-201ENST00000612648 864 ntBASIC18.88■□□□□ 0.61
HTR1EP28566 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HTR1EP28566 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HTR1EP28566 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HTR1EP28566 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HTR1EP28566 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HTR1EP28566 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HTR1EP28566 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.88■□□□□ 0.61
HTR1EP28566 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.88■□□□□ 0.61
HTR1EP28566 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.88■□□□□ 0.61
HTR1EP28566 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.88■□□□□ 0.61
HTR1EP28566 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
HTR1EP28566 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.88■□□□□ 0.61
HTR1EP28566 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
HTR1EP28566 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
HTR1EP28566 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HTR1EP28566 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HTR1EP28566 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.87■□□□□ 0.61
HTR1EP28566 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC18.87■□□□□ 0.61
HTR1EP28566 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.87■□□□□ 0.61
HTR1EP28566 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
HTR1EP28566 MIPEPP3-201ENST00000412105 444 ntBASIC18.87■□□□□ 0.61
HTR1EP28566 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HTR1EP28566 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.87■□□□□ 0.61
HTR1EP28566 MKRN4P-201ENST00000444706 1521 ntBASIC18.87■□□□□ 0.61
HTR1EP28566 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
HTR1EP28566 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.87■□□□□ 0.61
HTR1EP28566 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HTR1EP28566 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.87■□□□□ 0.61
HTR1EP28566 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.87■□□□□ 0.61
HTR1EP28566 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HTR1EP28566 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HTR1EP28566 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HTR1EP28566 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HTR1EP28566 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
HTR1EP28566 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.87■□□□□ 0.61
HTR1EP28566 AC013268.1-206ENST00000638368 961 ntBASIC18.87■□□□□ 0.61
HTR1EP28566 AC112229.1-201ENST00000639295 961 ntBASIC18.87■□□□□ 0.61
HTR1EP28566 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HTR1EP28566 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.87■□□□□ 0.61
HTR1EP28566 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.87■□□□□ 0.61
HTR1EP28566 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HTR1EP28566 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
HTR1EP28566 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
HTR1EP28566 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HTR1EP28566 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.86■□□□□ 0.61
HTR1EP28566 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.86■□□□□ 0.61
HTR1EP28566 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HTR1EP28566 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
HTR1EP28566 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.86■□□□□ 0.61
HTR1EP28566 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.86■□□□□ 0.61
HTR1EP28566 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HTR1EP28566 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.86■□□□□ 0.61
HTR1EP28566 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HTR1EP28566 RPS2P52-201ENST00000469610 820 ntBASIC18.86■□□□□ 0.61
HTR1EP28566 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC18.86■□□□□ 0.61
HTR1EP28566 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HTR1EP28566 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
HTR1EP28566 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HTR1EP28566 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
HTR1EP28566 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
HTR1EP28566 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.86■□□□□ 0.61
HTR1EP28566 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.86■□□□□ 0.61
HTR1EP28566 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HTR1EP28566 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HTR1EP28566 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HTR1EP28566 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HTR1EP28566 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
HTR1EP28566 AC009237.14-201ENST00000609975 1594 ntBASIC18.85■□□□□ 0.61
HTR1EP28566 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
HTR1EP28566 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
HTR1EP28566 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
HTR1EP28566 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HTR1EP28566 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
HTR1EP28566 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HTR1EP28566 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
HTR1EP28566 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
HTR1EP28566 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HTR1EP28566 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.85■□□□□ 0.61
HTR1EP28566 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
HTR1EP28566 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
HTR1EP28566 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
HTR1EP28566 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
HTR1EP28566 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC18.85■□□□□ 0.61
HTR1EP28566 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.85■□□□□ 0.61
HTR1EP28566 IRX5-204ENST00000560154 879 ntTSL 5 BASIC18.85■□□□□ 0.61
HTR1EP28566 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HTR1EP28566 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC18.85■□□□□ 0.61
HTR1EP28566 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
HTR1EP28566 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HTR1EP28566 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HTR1EP28566 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
HTR1EP28566 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HTR1EP28566 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.85■□□□□ 0.61
HTR1EP28566 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms