Protein–RNA interactions for Protein: P18505

GABRB1, Gamma-aminobutyric acid receptor subunit beta-1, humanhuman

Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB1P18505 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.83■□□□□ 0.44
GABRB1P18505 AL161938.1-201ENST00000569833 2180 ntBASIC17.83■□□□□ 0.44
GABRB1P18505 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
GABRB1P18505 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.83■□□□□ 0.44
GABRB1P18505 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
GABRB1P18505 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
GABRB1P18505 CYP21A1P-202ENST00000354927 1481 ntBASIC17.82■□□□□ 0.44
GABRB1P18505 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
GABRB1P18505 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
GABRB1P18505 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
GABRB1P18505 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
GABRB1P18505 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.82■□□□□ 0.44
GABRB1P18505 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
GABRB1P18505 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
GABRB1P18505 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC17.82■□□□□ 0.44
GABRB1P18505 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
GABRB1P18505 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
GABRB1P18505 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
GABRB1P18505 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
GABRB1P18505 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
GABRB1P18505 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
GABRB1P18505 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
GABRB1P18505 NME4-202ENST00000382940 766 ntTSL 3 BASIC17.82■□□□□ 0.44
GABRB1P18505 RHOF-204ENST00000537265 699 ntTSL 2 BASIC17.82■□□□□ 0.44
GABRB1P18505 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC17.82■□□□□ 0.44
GABRB1P18505 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC17.82■□□□□ 0.44
GABRB1P18505 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC17.82■□□□□ 0.44
GABRB1P18505 AL031963.3-201ENST00000606441 850 ntBASIC17.82■□□□□ 0.44
GABRB1P18505 NME4-211ENST00000620944 1193 ntTSL 2 BASIC17.82■□□□□ 0.44
GABRB1P18505 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
GABRB1P18505 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
GABRB1P18505 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
GABRB1P18505 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.82■□□□□ 0.44
GABRB1P18505 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
GABRB1P18505 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
GABRB1P18505 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
GABRB1P18505 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
GABRB1P18505 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
GABRB1P18505 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
GABRB1P18505 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
GABRB1P18505 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
GABRB1P18505 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
GABRB1P18505 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.81■□□□□ 0.44
GABRB1P18505 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC17.81■□□□□ 0.44
GABRB1P18505 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
GABRB1P18505 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
GABRB1P18505 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
GABRB1P18505 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
GABRB1P18505 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.81■□□□□ 0.44
GABRB1P18505 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
GABRB1P18505 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC17.81■□□□□ 0.44
GABRB1P18505 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
GABRB1P18505 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
GABRB1P18505 AC027612.3-201ENST00000413684 1047 ntBASIC17.81■□□□□ 0.44
GABRB1P18505 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC17.81■□□□□ 0.44
GABRB1P18505 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC17.81■□□□□ 0.44
GABRB1P18505 SUDS3P1-201ENST00000505831 966 ntBASIC17.81■□□□□ 0.44
GABRB1P18505 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC17.81■□□□□ 0.44
GABRB1P18505 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC17.81■□□□□ 0.44
GABRB1P18505 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.81■□□□□ 0.44
GABRB1P18505 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
GABRB1P18505 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
GABRB1P18505 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.81■□□□□ 0.44
GABRB1P18505 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
GABRB1P18505 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
GABRB1P18505 AC006333.2-201ENST00000607957 2099 ntBASIC17.81■□□□□ 0.44
GABRB1P18505 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
GABRB1P18505 AC104581.1-202ENST00000635932 2618 ntBASIC17.81■□□□□ 0.44
GABRB1P18505 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
GABRB1P18505 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
GABRB1P18505 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
GABRB1P18505 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
GABRB1P18505 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
GABRB1P18505 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GABRB1P18505 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GABRB1P18505 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
GABRB1P18505 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GABRB1P18505 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
GABRB1P18505 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.8■□□□□ 0.44
GABRB1P18505 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GABRB1P18505 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
GABRB1P18505 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC17.8■□□□□ 0.44
GABRB1P18505 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC17.8■□□□□ 0.44
GABRB1P18505 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
GABRB1P18505 AC110285.6-201ENST00000617652 491 ntBASIC17.8■□□□□ 0.44
GABRB1P18505 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC17.8■□□□□ 0.44
GABRB1P18505 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC17.8■□□□□ 0.44
GABRB1P18505 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GABRB1P18505 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GABRB1P18505 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GABRB1P18505 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
GABRB1P18505 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
GABRB1P18505 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
GABRB1P18505 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
GABRB1P18505 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
GABRB1P18505 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GABRB1P18505 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
GABRB1P18505 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
GABRB1P18505 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
GABRB1P18505 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms