Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 PWWP2AP1-201ENST00000429776 2273 ntBASIC21.73■■□□□ 1.07
TPM1P09493 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TPM1P09493 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
TPM1P09493 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
TPM1P09493 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
TPM1P09493 STK25-204ENST00000405585 1643 ntTSL 2 BASIC21.73■■□□□ 1.07
TPM1P09493 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
TPM1P09493 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TPM1P09493 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
TPM1P09493 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TPM1P09493 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TPM1P09493 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TPM1P09493 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TPM1P09493 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC21.72■■□□□ 1.07
TPM1P09493 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TPM1P09493 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TPM1P09493 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TPM1P09493 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TPM1P09493 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
TPM1P09493 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC21.72■■□□□ 1.07
TPM1P09493 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TPM1P09493 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC21.72■■□□□ 1.07
TPM1P09493 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TPM1P09493 Z82202.1-201ENST00000623446 1880 ntBASIC21.72■■□□□ 1.07
TPM1P09493 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
TPM1P09493 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC21.72■■□□□ 1.07
TPM1P09493 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC21.72■■□□□ 1.07
TPM1P09493 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TPM1P09493 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TPM1P09493 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
TPM1P09493 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.72■■□□□ 1.07
TPM1P09493 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
TPM1P09493 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
TPM1P09493 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
TPM1P09493 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
TPM1P09493 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TPM1P09493 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TPM1P09493 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TPM1P09493 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TPM1P09493 STK25-205ENST00000405883 1904 ntTSL 2 BASIC21.71■■□□□ 1.07
TPM1P09493 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
TPM1P09493 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TPM1P09493 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TPM1P09493 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TPM1P09493 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TPM1P09493 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC21.71■■□□□ 1.07
TPM1P09493 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC21.71■■□□□ 1.07
TPM1P09493 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TPM1P09493 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC21.71■■□□□ 1.07
TPM1P09493 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TPM1P09493 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
TPM1P09493 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
TPM1P09493 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
TPM1P09493 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC21.71■■□□□ 1.07
TPM1P09493 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
TPM1P09493 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TPM1P09493 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
TPM1P09493 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TPM1P09493 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TPM1P09493 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TPM1P09493 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC21.71■■□□□ 1.07
TPM1P09493 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
TPM1P09493 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TPM1P09493 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC21.7■■□□□ 1.07
TPM1P09493 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.07
TPM1P09493 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TPM1P09493 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TPM1P09493 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
TPM1P09493 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TPM1P09493 VMO1-204ENST00000441199 741 ntTSL 2 BASIC21.7■■□□□ 1.06
TPM1P09493 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC21.7■■□□□ 1.06
TPM1P09493 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TPM1P09493 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
TPM1P09493 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC21.7■■□□□ 1.06
TPM1P09493 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC21.7■■□□□ 1.06
TPM1P09493 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TPM1P09493 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TPM1P09493 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TPM1P09493 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC21.7■■□□□ 1.06
TPM1P09493 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TPM1P09493 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TPM1P09493 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
TPM1P09493 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TPM1P09493 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
TPM1P09493 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
TPM1P09493 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
TPM1P09493 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC21.69■■□□□ 1.06
TPM1P09493 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TPM1P09493 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TPM1P09493 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TPM1P09493 KRT19P1-201ENST00000405746 1186 ntBASIC21.69■■□□□ 1.06
TPM1P09493 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
TPM1P09493 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC21.69■■□□□ 1.06
TPM1P09493 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.69■■□□□ 1.06
TPM1P09493 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC21.69■■□□□ 1.06
TPM1P09493 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC21.69■■□□□ 1.06
TPM1P09493 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC21.69■■□□□ 1.06
TPM1P09493 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TPM1P09493 KRT16P6-202ENST00000425692 1426 ntBASIC21.69■■□□□ 1.06
TPM1P09493 AC004854.2-201ENST00000608450 1441 ntBASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms