Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CD48P09326 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.49■□□□□ 0.87
CD48P09326 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CD48P09326 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CD48P09326 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.48■□□□□ 0.87
CD48P09326 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.48■□□□□ 0.87
CD48P09326 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.48■□□□□ 0.87
CD48P09326 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CD48P09326 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CD48P09326 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.48■□□□□ 0.87
CD48P09326 HLA-L-209ENST00000420110 1011 ntBASIC20.48■□□□□ 0.87
CD48P09326 AC069152.1-201ENST00000438030 544 ntBASIC20.48■□□□□ 0.87
CD48P09326 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CD48P09326 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.48■□□□□ 0.87
CD48P09326 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.48■□□□□ 0.87
CD48P09326 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.48■□□□□ 0.87
CD48P09326 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CD48P09326 AC093484.2-201ENST00000580996 2166 ntBASIC20.48■□□□□ 0.87
CD48P09326 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20.48■□□□□ 0.87
CD48P09326 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CD48P09326 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.47■□□□□ 0.87
CD48P09326 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.47■□□□□ 0.87
CD48P09326 AC092368.3-202ENST00000574180 1591 ntBASIC20.47■□□□□ 0.87
CD48P09326 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CD48P09326 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
CD48P09326 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
CD48P09326 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CD48P09326 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CD48P09326 AC073210.2-201ENST00000430369 194 ntBASIC20.47■□□□□ 0.87
CD48P09326 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
CD48P09326 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.47■□□□□ 0.87
CD48P09326 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.47■□□□□ 0.87
CD48P09326 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.47■□□□□ 0.87
CD48P09326 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.47■□□□□ 0.87
CD48P09326 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CD48P09326 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CD48P09326 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CD48P09326 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
CD48P09326 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
CD48P09326 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CD48P09326 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
CD48P09326 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CD48P09326 AC116351.2-201ENST00000606540 1585 ntBASIC20.46■□□□□ 0.87
CD48P09326 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.46■□□□□ 0.87
CD48P09326 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.46■□□□□ 0.87
CD48P09326 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CD48P09326 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.46■□□□□ 0.87
CD48P09326 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
CD48P09326 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.46■□□□□ 0.87
CD48P09326 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.46■□□□□ 0.87
CD48P09326 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CD48P09326 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.46■□□□□ 0.87
CD48P09326 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.46■□□□□ 0.87
CD48P09326 AL390719.1-204ENST00000412397 1219 ntBASIC20.46■□□□□ 0.87
CD48P09326 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CD48P09326 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CD48P09326 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
CD48P09326 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CD48P09326 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CD48P09326 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CD48P09326 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
CD48P09326 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CD48P09326 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CD48P09326 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CD48P09326 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CD48P09326 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CD48P09326 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CD48P09326 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.45■□□□□ 0.86
CD48P09326 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
CD48P09326 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.45■□□□□ 0.86
CD48P09326 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.45■□□□□ 0.86
CD48P09326 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.45■□□□□ 0.86
CD48P09326 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CD48P09326 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CD48P09326 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CD48P09326 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
CD48P09326 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CD48P09326 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
CD48P09326 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC20.45■□□□□ 0.86
CD48P09326 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.45■□□□□ 0.86
CD48P09326 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CD48P09326 HLA-B-256ENST00000639848 1089 ntBASIC20.45■□□□□ 0.86
CD48P09326 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC20.45■□□□□ 0.86
CD48P09326 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
CD48P09326 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.45■□□□□ 0.86
CD48P09326 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CD48P09326 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.45■□□□□ 0.86
CD48P09326 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
CD48P09326 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.45■□□□□ 0.86
CD48P09326 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CD48P09326 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.45■□□□□ 0.86
CD48P09326 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
CD48P09326 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.45■□□□□ 0.86
CD48P09326 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
CD48P09326 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CD48P09326 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.44■□□□□ 0.86
CD48P09326 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.44■□□□□ 0.86
CD48P09326 AL355802.2-201ENST00000402069 882 ntBASIC20.44■□□□□ 0.86
CD48P09326 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.44■□□□□ 0.86
CD48P09326 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms