Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CAPN1P07384 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CAPN1P07384 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CAPN1P07384 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.42■□□□□ 0.7
CAPN1P07384 KRT18P68-201ENST00000392293 1000 ntBASIC19.42■□□□□ 0.7
CAPN1P07384 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.42■□□□□ 0.7
CAPN1P07384 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.42■□□□□ 0.7
CAPN1P07384 MMAB-206ENST00000540016 945 ntTSL 3 BASIC19.42■□□□□ 0.7
CAPN1P07384 AL589743.5-201ENST00000616611 1050 ntBASIC19.42■□□□□ 0.7
CAPN1P07384 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
CAPN1P07384 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CAPN1P07384 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CAPN1P07384 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.42■□□□□ 0.7
CAPN1P07384 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CAPN1P07384 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CAPN1P07384 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CAPN1P07384 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CAPN1P07384 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CAPN1P07384 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
CAPN1P07384 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.41■□□□□ 0.7
CAPN1P07384 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CAPN1P07384 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CAPN1P07384 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.41■□□□□ 0.7
CAPN1P07384 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CAPN1P07384 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CAPN1P07384 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CAPN1P07384 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.41■□□□□ 0.7
CAPN1P07384 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CAPN1P07384 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CAPN1P07384 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CAPN1P07384 AL158211.5-201ENST00000623583 2518 ntBASIC19.41■□□□□ 0.7
CAPN1P07384 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.41■□□□□ 0.7
CAPN1P07384 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.41■□□□□ 0.7
CAPN1P07384 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CAPN1P07384 TMEM179-206ENST00000616017 1645 ntBASIC19.4■□□□□ 0.7
CAPN1P07384 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CAPN1P07384 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
CAPN1P07384 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CAPN1P07384 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CAPN1P07384 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CAPN1P07384 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CAPN1P07384 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CAPN1P07384 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.4■□□□□ 0.7
CAPN1P07384 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.4■□□□□ 0.7
CAPN1P07384 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CAPN1P07384 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CAPN1P07384 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
CAPN1P07384 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CAPN1P07384 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CAPN1P07384 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.4■□□□□ 0.7
CAPN1P07384 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CAPN1P07384 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CAPN1P07384 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CAPN1P07384 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
CAPN1P07384 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CAPN1P07384 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CAPN1P07384 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CAPN1P07384 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.39■□□□□ 0.69
CAPN1P07384 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CAPN1P07384 AC098590.1-201ENST00000468126 897 ntBASIC19.39■□□□□ 0.69
CAPN1P07384 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.39■□□□□ 0.69
CAPN1P07384 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
CAPN1P07384 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
CAPN1P07384 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.39■□□□□ 0.69
CAPN1P07384 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CAPN1P07384 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
CAPN1P07384 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CAPN1P07384 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CAPN1P07384 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CAPN1P07384 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.39■□□□□ 0.69
CAPN1P07384 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CAPN1P07384 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CAPN1P07384 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.39■□□□□ 0.69
CAPN1P07384 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CAPN1P07384 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.39■□□□□ 0.69
CAPN1P07384 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CAPN1P07384 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CAPN1P07384 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CAPN1P07384 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CAPN1P07384 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CAPN1P07384 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.38■□□□□ 0.69
CAPN1P07384 AC026366.1-201ENST00000488803 879 ntBASIC19.38■□□□□ 0.69
CAPN1P07384 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CAPN1P07384 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CAPN1P07384 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC19.38■□□□□ 0.69
CAPN1P07384 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CAPN1P07384 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CAPN1P07384 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.38■□□□□ 0.69
CAPN1P07384 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CAPN1P07384 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
CAPN1P07384 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.38■□□□□ 0.69
CAPN1P07384 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CAPN1P07384 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.37■□□□□ 0.69
CAPN1P07384 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CAPN1P07384 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CAPN1P07384 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CAPN1P07384 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CAPN1P07384 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CAPN1P07384 PTBP1P-201ENST00000554374 1601 ntBASIC19.37■□□□□ 0.69
CAPN1P07384 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms