Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
APOBP04114 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
APOBP04114 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC12.41□□□□□ -0.42
APOBP04114 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
APOBP04114 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
APOBP04114 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
APOBP04114 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC12.41□□□□□ -0.42
APOBP04114 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
APOBP04114 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC12.41□□□□□ -0.42
APOBP04114 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
APOBP04114 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC12.41□□□□□ -0.42
APOBP04114 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC12.41□□□□□ -0.42
APOBP04114 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC12.41□□□□□ -0.42
APOBP04114 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC12.41□□□□□ -0.42
APOBP04114 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC12.41□□□□□ -0.42
APOBP04114 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
APOBP04114 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
APOBP04114 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
APOBP04114 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
APOBP04114 AC009078.2-202ENST00000463353 338 ntBASIC12.4□□□□□ -0.42
APOBP04114 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC12.4□□□□□ -0.42
APOBP04114 AC069148.1-201ENST00000608741 768 ntBASIC12.4□□□□□ -0.42
APOBP04114 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
APOBP04114 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
APOBP04114 AC005229.4-201ENST00000610085 2198 ntBASIC12.4□□□□□ -0.42
APOBP04114 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
APOBP04114 GCSHP2-201ENST00000560971 527 ntBASIC12.4□□□□□ -0.42
APOBP04114 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
APOBP04114 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
APOBP04114 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC12.4□□□□□ -0.42
APOBP04114 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
APOBP04114 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
APOBP04114 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
APOBP04114 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC12.4□□□□□ -0.42
APOBP04114 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC12.4□□□□□ -0.42
APOBP04114 AC116562.4-202ENST00000641738 218 ntBASIC12.4□□□□□ -0.42
APOBP04114 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
APOBP04114 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC12.4□□□□□ -0.42
APOBP04114 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
APOBP04114 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
APOBP04114 AC018553.1-201ENST00000616682 1458 ntBASIC12.4□□□□□ -0.42
APOBP04114 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
APOBP04114 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC12.4□□□□□ -0.43
APOBP04114 ATP5G2P1-201ENST00000433580 426 ntBASIC12.4□□□□□ -0.43
APOBP04114 SNX5-210ENST00000481323 562 ntTSL 3 BASIC12.4□□□□□ -0.43
APOBP04114 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
APOBP04114 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC12.4□□□□□ -0.43
APOBP04114 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC12.4□□□□□ -0.43
APOBP04114 CASK-201ENST00000378154 2494 ntTSL 5 BASIC12.4□□□□□ -0.43
APOBP04114 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC12.39□□□□□ -0.43
APOBP04114 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC12.39□□□□□ -0.43
APOBP04114 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
APOBP04114 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC12.39□□□□□ -0.43
APOBP04114 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
APOBP04114 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC12.39□□□□□ -0.43
APOBP04114 CCR12P-201ENST00000446203 998 ntBASIC12.39□□□□□ -0.43
APOBP04114 SKP2-204ENST00000508514 821 ntTSL 3 BASIC12.39□□□□□ -0.43
APOBP04114 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC12.39□□□□□ -0.43
APOBP04114 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
APOBP04114 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
APOBP04114 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
APOBP04114 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
APOBP04114 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC12.39□□□□□ -0.43
APOBP04114 H19-201ENST00000411754 1788 ntTSL 5 BASIC12.39□□□□□ -0.43
APOBP04114 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
APOBP04114 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
APOBP04114 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
APOBP04114 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
APOBP04114 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
APOBP04114 AC004951.3-201ENST00000418645 1148 ntBASIC12.39□□□□□ -0.43
APOBP04114 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC12.39□□□□□ -0.43
APOBP04114 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC12.39□□□□□ -0.43
APOBP04114 GPX4-207ENST00000589115 812 ntTSL 2 BASIC12.39□□□□□ -0.43
APOBP04114 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
APOBP04114 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
APOBP04114 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
APOBP04114 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
APOBP04114 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
APOBP04114 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
APOBP04114 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
APOBP04114 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC12.39□□□□□ -0.43
APOBP04114 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
APOBP04114 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
APOBP04114 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
APOBP04114 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
APOBP04114 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC12.39□□□□□ -0.43
APOBP04114 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
APOBP04114 GXYLT1P6-201ENST00000456472 1187 ntBASIC12.39□□□□□ -0.43
APOBP04114 EMBP1-201ENST00000458200 901 ntBASIC12.39□□□□□ -0.43
APOBP04114 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC12.39□□□□□ -0.43
APOBP04114 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC12.39□□□□□ -0.43
APOBP04114 KLK8-205ENST00000593490 267 ntTSL 3 BASIC12.39□□□□□ -0.43
APOBP04114 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC12.39□□□□□ -0.43
APOBP04114 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
APOBP04114 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
APOBP04114 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
APOBP04114 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
APOBP04114 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC12.38□□□□□ -0.43
APOBP04114 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
APOBP04114 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms