Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC19.85■□□□□ 0.77
VAPBO95292 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC19.85■□□□□ 0.77
VAPBO95292 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC19.85■□□□□ 0.77
VAPBO95292 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
VAPBO95292 AC092666.2-201ENST00000613287 246 ntBASIC19.85■□□□□ 0.77
VAPBO95292 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.85■□□□□ 0.77
VAPBO95292 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
VAPBO95292 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
VAPBO95292 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
VAPBO95292 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.85■□□□□ 0.77
VAPBO95292 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
VAPBO95292 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
VAPBO95292 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
VAPBO95292 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
VAPBO95292 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
VAPBO95292 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
VAPBO95292 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.84■□□□□ 0.77
VAPBO95292 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
VAPBO95292 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
VAPBO95292 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
VAPBO95292 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
VAPBO95292 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19.84■□□□□ 0.77
VAPBO95292 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.84■□□□□ 0.77
VAPBO95292 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.84■□□□□ 0.77
VAPBO95292 SLC29A4P1-201ENST00000398760 971 ntBASIC19.84■□□□□ 0.77
VAPBO95292 DUSP5P2-201ENST00000426873 1033 ntBASIC19.84■□□□□ 0.77
VAPBO95292 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.84■□□□□ 0.77
VAPBO95292 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.84■□□□□ 0.77
VAPBO95292 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
VAPBO95292 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.84■□□□□ 0.77
VAPBO95292 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
VAPBO95292 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
VAPBO95292 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.84■□□□□ 0.77
VAPBO95292 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
VAPBO95292 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
VAPBO95292 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
VAPBO95292 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
VAPBO95292 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.84■□□□□ 0.77
VAPBO95292 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.83■□□□□ 0.77
VAPBO95292 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
VAPBO95292 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.83■□□□□ 0.77
VAPBO95292 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
VAPBO95292 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
VAPBO95292 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
VAPBO95292 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
VAPBO95292 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
VAPBO95292 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
VAPBO95292 MAP2K4P1-201ENST00000438453 1195 ntBASIC19.83■□□□□ 0.77
VAPBO95292 GUSBP6-202ENST00000438529 1198 ntBASIC19.83■□□□□ 0.77
VAPBO95292 TSPY6P-201ENST00000448518 926 ntBASIC19.83■□□□□ 0.77
VAPBO95292 AC092118.2-201ENST00000613495 667 ntBASIC19.83■□□□□ 0.77
VAPBO95292 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.83■□□□□ 0.77
VAPBO95292 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC19.83■□□□□ 0.77
VAPBO95292 AC087289.5-201ENST00000586076 3175 ntBASIC19.83■□□□□ 0.76
VAPBO95292 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.76
VAPBO95292 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.83■□□□□ 0.76
VAPBO95292 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
VAPBO95292 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
VAPBO95292 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
VAPBO95292 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
VAPBO95292 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VAPBO95292 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VAPBO95292 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
VAPBO95292 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VAPBO95292 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
VAPBO95292 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
VAPBO95292 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
VAPBO95292 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VAPBO95292 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
VAPBO95292 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.82■□□□□ 0.76
VAPBO95292 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
VAPBO95292 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.82■□□□□ 0.76
VAPBO95292 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
VAPBO95292 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC19.82■□□□□ 0.76
VAPBO95292 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
VAPBO95292 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
VAPBO95292 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
VAPBO95292 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.82■□□□□ 0.76
VAPBO95292 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
VAPBO95292 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.82■□□□□ 0.76
VAPBO95292 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
VAPBO95292 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VAPBO95292 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VAPBO95292 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
VAPBO95292 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.81■□□□□ 0.76
VAPBO95292 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
VAPBO95292 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
VAPBO95292 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.81■□□□□ 0.76
VAPBO95292 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.81■□□□□ 0.76
VAPBO95292 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.81■□□□□ 0.76
VAPBO95292 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
VAPBO95292 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.81■□□□□ 0.76
VAPBO95292 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
VAPBO95292 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
VAPBO95292 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC19.81■□□□□ 0.76
VAPBO95292 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
VAPBO95292 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC19.81■□□□□ 0.76
VAPBO95292 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC19.81■□□□□ 0.76
VAPBO95292 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.81■□□□□ 0.76
VAPBO95292 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms