Protein–RNA interactions for Protein: O95076

ALX3, Homeobox protein aristaless-like 3, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX3O95076 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
ALX3O95076 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ALX3O95076 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
ALX3O95076 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.41■□□□□ 0.38
ALX3O95076 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.41■□□□□ 0.38
ALX3O95076 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
ALX3O95076 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ALX3O95076 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ALX3O95076 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ALX3O95076 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ALX3O95076 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
ALX3O95076 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ALX3O95076 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
ALX3O95076 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ALX3O95076 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ALX3O95076 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
ALX3O95076 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ALX3O95076 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ALX3O95076 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
ALX3O95076 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ALX3O95076 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ALX3O95076 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ALX3O95076 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ALX3O95076 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
ALX3O95076 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ALX3O95076 PGM5P4-201ENST00000421970 445 ntBASIC17.4■□□□□ 0.38
ALX3O95076 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC17.4■□□□□ 0.38
ALX3O95076 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC17.4■□□□□ 0.38
ALX3O95076 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ALX3O95076 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ALX3O95076 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC17.4■□□□□ 0.38
ALX3O95076 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ALX3O95076 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ALX3O95076 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ALX3O95076 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ALX3O95076 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.4■□□□□ 0.38
ALX3O95076 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.39■□□□□ 0.38
ALX3O95076 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
ALX3O95076 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
ALX3O95076 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.39■□□□□ 0.37
ALX3O95076 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
ALX3O95076 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.39■□□□□ 0.37
ALX3O95076 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.39■□□□□ 0.37
ALX3O95076 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ALX3O95076 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.39■□□□□ 0.37
ALX3O95076 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ALX3O95076 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ALX3O95076 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ALX3O95076 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC17.39■□□□□ 0.37
ALX3O95076 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC17.39■□□□□ 0.37
ALX3O95076 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ALX3O95076 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
ALX3O95076 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ALX3O95076 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.39■□□□□ 0.37
ALX3O95076 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC17.39■□□□□ 0.37
ALX3O95076 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
ALX3O95076 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ALX3O95076 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ALX3O95076 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC17.39■□□□□ 0.37
ALX3O95076 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ALX3O95076 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ALX3O95076 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ALX3O95076 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
ALX3O95076 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ALX3O95076 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC17.38■□□□□ 0.37
ALX3O95076 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
ALX3O95076 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ALX3O95076 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ALX3O95076 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ALX3O95076 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC17.38■□□□□ 0.37
ALX3O95076 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
ALX3O95076 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
ALX3O95076 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ALX3O95076 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
ALX3O95076 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ALX3O95076 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ALX3O95076 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
ALX3O95076 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC17.38■□□□□ 0.37
ALX3O95076 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC17.38■□□□□ 0.37
ALX3O95076 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
ALX3O95076 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ALX3O95076 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC17.38■□□□□ 0.37
ALX3O95076 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
ALX3O95076 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.38■□□□□ 0.37
ALX3O95076 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
ALX3O95076 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ALX3O95076 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
ALX3O95076 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ALX3O95076 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ALX3O95076 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ALX3O95076 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ALX3O95076 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ALX3O95076 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ALX3O95076 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC17.37■□□□□ 0.37
ALX3O95076 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
ALX3O95076 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ALX3O95076 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.37■□□□□ 0.37
ALX3O95076 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ALX3O95076 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ALX3O95076 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms