Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
CLSTN1O94985 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC21.82■■□□□ 1.08
CLSTN1O94985 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC21.82■■□□□ 1.08
CLSTN1O94985 APTR-205ENST00000447009 902 ntTSL 2 BASIC21.82■■□□□ 1.08
CLSTN1O94985 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC21.82■■□□□ 1.08
CLSTN1O94985 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC21.82■■□□□ 1.08
CLSTN1O94985 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC21.82■■□□□ 1.08
CLSTN1O94985 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC21.82■■□□□ 1.08
CLSTN1O94985 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
CLSTN1O94985 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
CLSTN1O94985 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CLSTN1O94985 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CLSTN1O94985 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CLSTN1O94985 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CLSTN1O94985 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC21.82■■□□□ 1.08
CLSTN1O94985 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
CLSTN1O94985 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CLSTN1O94985 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC21.81■■□□□ 1.08
CLSTN1O94985 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC21.81■■□□□ 1.08
CLSTN1O94985 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC21.81■■□□□ 1.08
CLSTN1O94985 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC21.81■■□□□ 1.08
CLSTN1O94985 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CLSTN1O94985 BET1L-207ENST00000529614 560 ntTSL 5 BASIC21.81■■□□□ 1.08
CLSTN1O94985 GAMT-205ENST00000640762 751 ntTSL 5 BASIC21.81■■□□□ 1.08
CLSTN1O94985 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CLSTN1O94985 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
CLSTN1O94985 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CLSTN1O94985 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
CLSTN1O94985 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC21.81■■□□□ 1.08
CLSTN1O94985 PCDHAC2-203ENST00000615316 3011 ntBASIC21.81■■□□□ 1.08
CLSTN1O94985 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CLSTN1O94985 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CLSTN1O94985 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC21.8■■□□□ 1.08
CLSTN1O94985 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CLSTN1O94985 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC21.8■■□□□ 1.08
CLSTN1O94985 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CLSTN1O94985 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC21.8■■□□□ 1.08
CLSTN1O94985 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CLSTN1O94985 SMG8-203ENST00000578922 2178 ntBASIC21.8■■□□□ 1.08
CLSTN1O94985 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
CLSTN1O94985 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC21.8■■□□□ 1.08
CLSTN1O94985 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CLSTN1O94985 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC21.8■■□□□ 1.08
CLSTN1O94985 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC21.8■■□□□ 1.08
CLSTN1O94985 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
CLSTN1O94985 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CLSTN1O94985 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CLSTN1O94985 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CLSTN1O94985 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC21.8■■□□□ 1.08
CLSTN1O94985 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC21.8■■□□□ 1.08
CLSTN1O94985 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CLSTN1O94985 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
CLSTN1O94985 PPP1R14BP2-201ENST00000426284 444 ntBASIC21.8■■□□□ 1.08
CLSTN1O94985 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
CLSTN1O94985 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC21.8■■□□□ 1.08
CLSTN1O94985 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC21.8■■□□□ 1.08
CLSTN1O94985 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC21.8■■□□□ 1.08
CLSTN1O94985 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC21.8■■□□□ 1.08
CLSTN1O94985 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC21.8■■□□□ 1.08
CLSTN1O94985 AC092118.2-201ENST00000613495 667 ntBASIC21.8■■□□□ 1.08
CLSTN1O94985 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CLSTN1O94985 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
CLSTN1O94985 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
CLSTN1O94985 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CLSTN1O94985 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CLSTN1O94985 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC21.8■■□□□ 1.08
CLSTN1O94985 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CLSTN1O94985 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC21.79■■□□□ 1.08
CLSTN1O94985 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CLSTN1O94985 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CLSTN1O94985 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CLSTN1O94985 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CLSTN1O94985 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CLSTN1O94985 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CLSTN1O94985 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CLSTN1O94985 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC21.79■■□□□ 1.08
CLSTN1O94985 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC21.79■■□□□ 1.08
CLSTN1O94985 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC21.79■■□□□ 1.08
CLSTN1O94985 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
CLSTN1O94985 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC21.79■■□□□ 1.08
CLSTN1O94985 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CLSTN1O94985 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC21.79■■□□□ 1.08
CLSTN1O94985 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC21.79■■□□□ 1.08
CLSTN1O94985 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
CLSTN1O94985 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CLSTN1O94985 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CLSTN1O94985 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
CLSTN1O94985 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC21.78■■□□□ 1.08
CLSTN1O94985 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.78■■□□□ 1.08
CLSTN1O94985 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC21.78■■□□□ 1.08
CLSTN1O94985 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
CLSTN1O94985 MFF-205ENST00000354503 1085 ntTSL 2 BASIC21.78■■□□□ 1.08
CLSTN1O94985 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
CLSTN1O94985 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC21.78■■□□□ 1.08
CLSTN1O94985 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
CLSTN1O94985 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
CLSTN1O94985 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CLSTN1O94985 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC21.78■■□□□ 1.08
CLSTN1O94985 AC133041.1-202ENST00000642053 222 ntBASIC21.78■■□□□ 1.08
CLSTN1O94985 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms