Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RFPL1O75677 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
RFPL1O75677 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
RFPL1O75677 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.81■□□□□ 0.76
RFPL1O75677 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.81■□□□□ 0.76
RFPL1O75677 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.81■□□□□ 0.76
RFPL1O75677 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RFPL1O75677 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.81■□□□□ 0.76
RFPL1O75677 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RFPL1O75677 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
RFPL1O75677 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC19.81■□□□□ 0.76
RFPL1O75677 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.81■□□□□ 0.76
RFPL1O75677 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.81■□□□□ 0.76
RFPL1O75677 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.81■□□□□ 0.76
RFPL1O75677 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
RFPL1O75677 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC19.81■□□□□ 0.76
RFPL1O75677 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RFPL1O75677 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
RFPL1O75677 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RFPL1O75677 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.81■□□□□ 0.76
RFPL1O75677 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
RFPL1O75677 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RFPL1O75677 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.8■□□□□ 0.76
RFPL1O75677 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RFPL1O75677 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RFPL1O75677 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RFPL1O75677 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
RFPL1O75677 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RFPL1O75677 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
RFPL1O75677 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RFPL1O75677 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.8■□□□□ 0.76
RFPL1O75677 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.8■□□□□ 0.76
RFPL1O75677 AL162412.1-201ENST00000567129 965 ntBASIC19.8■□□□□ 0.76
RFPL1O75677 MIR4758-201ENST00000577688 71 ntBASIC19.8■□□□□ 0.76
RFPL1O75677 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.8■□□□□ 0.76
RFPL1O75677 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RFPL1O75677 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RFPL1O75677 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.8■□□□□ 0.76
RFPL1O75677 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RFPL1O75677 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RFPL1O75677 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RFPL1O75677 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
RFPL1O75677 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RFPL1O75677 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RFPL1O75677 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.8■□□□□ 0.76
RFPL1O75677 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RFPL1O75677 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RFPL1O75677 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
RFPL1O75677 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.79■□□□□ 0.76
RFPL1O75677 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.79■□□□□ 0.76
RFPL1O75677 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
RFPL1O75677 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
RFPL1O75677 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RFPL1O75677 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
RFPL1O75677 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RFPL1O75677 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RFPL1O75677 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RFPL1O75677 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
RFPL1O75677 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
RFPL1O75677 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RFPL1O75677 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RFPL1O75677 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RFPL1O75677 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC19.79■□□□□ 0.76
RFPL1O75677 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
RFPL1O75677 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19.79■□□□□ 0.76
RFPL1O75677 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
RFPL1O75677 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RFPL1O75677 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RFPL1O75677 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RFPL1O75677 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RFPL1O75677 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.79■□□□□ 0.76
RFPL1O75677 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.79■□□□□ 0.76
RFPL1O75677 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.79■□□□□ 0.76
RFPL1O75677 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.78■□□□□ 0.76
RFPL1O75677 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RFPL1O75677 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.78■□□□□ 0.76
RFPL1O75677 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RFPL1O75677 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RFPL1O75677 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
RFPL1O75677 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.78■□□□□ 0.76
RFPL1O75677 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RFPL1O75677 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RFPL1O75677 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RFPL1O75677 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RFPL1O75677 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.78■□□□□ 0.76
RFPL1O75677 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RFPL1O75677 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC19.78■□□□□ 0.76
RFPL1O75677 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RFPL1O75677 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RFPL1O75677 AC098934.4-201ENST00000564127 592 ntBASIC19.78■□□□□ 0.76
RFPL1O75677 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.78■□□□□ 0.76
RFPL1O75677 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RFPL1O75677 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.78■□□□□ 0.76
RFPL1O75677 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RFPL1O75677 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC19.78■□□□□ 0.76
RFPL1O75677 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RFPL1O75677 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RFPL1O75677 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.78■□□□□ 0.76
RFPL1O75677 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
RFPL1O75677 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms