Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CPNE3O75131 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
CPNE3O75131 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.94■□□□□ 0.62
CPNE3O75131 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CPNE3O75131 PTBP1P-201ENST00000554374 1601 ntBASIC18.94■□□□□ 0.62
CPNE3O75131 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CPNE3O75131 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CPNE3O75131 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CPNE3O75131 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CPNE3O75131 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.94■□□□□ 0.62
CPNE3O75131 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
CPNE3O75131 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC18.94■□□□□ 0.62
CPNE3O75131 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.94■□□□□ 0.62
CPNE3O75131 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC18.94■□□□□ 0.62
CPNE3O75131 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
CPNE3O75131 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.94■□□□□ 0.62
CPNE3O75131 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CPNE3O75131 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CPNE3O75131 KRT17P2-201ENST00000300992 1314 ntBASIC18.94■□□□□ 0.62
CPNE3O75131 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.94■□□□□ 0.62
CPNE3O75131 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CPNE3O75131 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CPNE3O75131 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.93■□□□□ 0.62
CPNE3O75131 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CPNE3O75131 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CPNE3O75131 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CPNE3O75131 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CPNE3O75131 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CPNE3O75131 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
CPNE3O75131 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.93■□□□□ 0.62
CPNE3O75131 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CPNE3O75131 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CPNE3O75131 NBPF21P-201ENST00000425093 1451 ntBASIC18.93■□□□□ 0.62
CPNE3O75131 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CPNE3O75131 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CPNE3O75131 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CPNE3O75131 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.93■□□□□ 0.62
CPNE3O75131 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CPNE3O75131 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CPNE3O75131 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CPNE3O75131 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CPNE3O75131 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CPNE3O75131 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CPNE3O75131 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CPNE3O75131 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.93■□□□□ 0.62
CPNE3O75131 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
CPNE3O75131 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CPNE3O75131 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.93■□□□□ 0.62
CPNE3O75131 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC18.93■□□□□ 0.62
CPNE3O75131 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.93■□□□□ 0.62
CPNE3O75131 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC18.93■□□□□ 0.62
CPNE3O75131 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
CPNE3O75131 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CPNE3O75131 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
CPNE3O75131 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CPNE3O75131 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CPNE3O75131 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CPNE3O75131 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CPNE3O75131 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.92■□□□□ 0.62
CPNE3O75131 AL157384.1-201ENST00000445995 2473 ntBASIC18.92■□□□□ 0.62
CPNE3O75131 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.92■□□□□ 0.62
CPNE3O75131 TSPY7P-201ENST00000431358 1114 ntBASIC18.92■□□□□ 0.62
CPNE3O75131 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
CPNE3O75131 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.92■□□□□ 0.62
CPNE3O75131 KRT16P5-201ENST00000455284 522 ntBASIC18.92■□□□□ 0.62
CPNE3O75131 DHDH-203ENST00000522614 776 ntTSL 5 BASIC18.92■□□□□ 0.62
CPNE3O75131 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.92■□□□□ 0.62
CPNE3O75131 MIR4785-201ENST00000585005 73 ntBASIC18.92■□□□□ 0.62
CPNE3O75131 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CPNE3O75131 AC073912.3-201ENST00000624414 853 ntBASIC18.92■□□□□ 0.62
CPNE3O75131 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.92■□□□□ 0.62
CPNE3O75131 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CPNE3O75131 FP700111.2-201ENST00000619190 1892 ntBASIC18.92■□□□□ 0.62
CPNE3O75131 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
CPNE3O75131 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.92■□□□□ 0.62
CPNE3O75131 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CPNE3O75131 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
CPNE3O75131 AC006128.1-201ENST00000624704 1661 ntBASIC18.92■□□□□ 0.62
CPNE3O75131 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CPNE3O75131 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CPNE3O75131 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CPNE3O75131 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CPNE3O75131 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CPNE3O75131 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CPNE3O75131 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CPNE3O75131 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.91■□□□□ 0.62
CPNE3O75131 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CPNE3O75131 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CPNE3O75131 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CPNE3O75131 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.91■□□□□ 0.62
CPNE3O75131 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CPNE3O75131 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CPNE3O75131 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CPNE3O75131 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CPNE3O75131 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC18.91■□□□□ 0.62
CPNE3O75131 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.91■□□□□ 0.62
CPNE3O75131 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC18.91■□□□□ 0.62
CPNE3O75131 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CPNE3O75131 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.91■□□□□ 0.62
CPNE3O75131 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms