Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
URB1O60287 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
URB1O60287 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
URB1O60287 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.68■□□□□ 0.58
URB1O60287 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
URB1O60287 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
URB1O60287 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.68■□□□□ 0.58
URB1O60287 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
URB1O60287 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.68■□□□□ 0.58
URB1O60287 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
URB1O60287 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
URB1O60287 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC18.68■□□□□ 0.58
URB1O60287 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.68■□□□□ 0.58
URB1O60287 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.68■□□□□ 0.58
URB1O60287 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.68■□□□□ 0.58
URB1O60287 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.68■□□□□ 0.58
URB1O60287 KRT8P10-201ENST00000450021 1447 ntBASIC18.68■□□□□ 0.58
URB1O60287 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
URB1O60287 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
URB1O60287 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
URB1O60287 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
URB1O60287 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
URB1O60287 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
URB1O60287 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
URB1O60287 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
URB1O60287 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
URB1O60287 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.67■□□□□ 0.58
URB1O60287 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.67■□□□□ 0.58
URB1O60287 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.67■□□□□ 0.58
URB1O60287 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.67■□□□□ 0.58
URB1O60287 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.67■□□□□ 0.58
URB1O60287 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
URB1O60287 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC18.67■□□□□ 0.58
URB1O60287 DGCR10-201ENST00000609839 495 ntBASIC18.67■□□□□ 0.58
URB1O60287 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC18.67■□□□□ 0.58
URB1O60287 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC18.67■□□□□ 0.58
URB1O60287 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
URB1O60287 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
URB1O60287 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
URB1O60287 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
URB1O60287 AC233723.2-201ENST00000623798 2106 ntBASIC18.67■□□□□ 0.58
URB1O60287 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
URB1O60287 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC18.67■□□□□ 0.58
URB1O60287 B3GAT3P1-201ENST00000471720 806 ntBASIC18.67■□□□□ 0.58
URB1O60287 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.67■□□□□ 0.58
URB1O60287 AC093458.2-201ENST00000623150 629 ntBASIC18.67■□□□□ 0.58
URB1O60287 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
URB1O60287 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC18.66■□□□□ 0.58
URB1O60287 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
URB1O60287 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
URB1O60287 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
URB1O60287 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
URB1O60287 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
URB1O60287 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.66■□□□□ 0.58
URB1O60287 AC069148.1-201ENST00000608741 768 ntBASIC18.66■□□□□ 0.58
URB1O60287 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
URB1O60287 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
URB1O60287 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.66■□□□□ 0.58
URB1O60287 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
URB1O60287 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
URB1O60287 AC005332.1-201ENST00000577698 1310 ntBASIC18.66■□□□□ 0.58
URB1O60287 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
URB1O60287 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
URB1O60287 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
URB1O60287 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
URB1O60287 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
URB1O60287 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
URB1O60287 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
URB1O60287 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.66■□□□□ 0.58
URB1O60287 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.66■□□□□ 0.58
URB1O60287 GPALPP1-207ENST00000611650 899 ntBASIC18.66■□□□□ 0.58
URB1O60287 MYB-221ENST00000527615 2381 ntTSL 5 BASIC18.66■□□□□ 0.58
URB1O60287 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
URB1O60287 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
URB1O60287 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
URB1O60287 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
URB1O60287 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
URB1O60287 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.65■□□□□ 0.58
URB1O60287 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.65■□□□□ 0.58
URB1O60287 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.65■□□□□ 0.58
URB1O60287 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
URB1O60287 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
URB1O60287 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
URB1O60287 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
URB1O60287 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.65■□□□□ 0.58
URB1O60287 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
URB1O60287 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
URB1O60287 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
URB1O60287 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
URB1O60287 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
URB1O60287 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
URB1O60287 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.65■□□□□ 0.58
URB1O60287 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.65■□□□□ 0.58
URB1O60287 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC18.65■□□□□ 0.58
URB1O60287 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
URB1O60287 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
URB1O60287 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC18.64■□□□□ 0.57
URB1O60287 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.64■□□□□ 0.57
URB1O60287 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
URB1O60287 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms