Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
SSNA1O43805 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SSNA1O43805 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
SSNA1O43805 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
SSNA1O43805 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SSNA1O43805 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.84■□□□□ 0.29
SSNA1O43805 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SSNA1O43805 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.84■□□□□ 0.29
SSNA1O43805 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.84■□□□□ 0.29
SSNA1O43805 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
SSNA1O43805 CD72-202ENST00000378430 585 ntTSL 3 BASIC16.84■□□□□ 0.29
SSNA1O43805 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
SSNA1O43805 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC16.84■□□□□ 0.29
SSNA1O43805 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SSNA1O43805 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SSNA1O43805 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC16.84■□□□□ 0.29
SSNA1O43805 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SSNA1O43805 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.84■□□□□ 0.29
SSNA1O43805 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SSNA1O43805 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SSNA1O43805 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC16.84■□□□□ 0.29
SSNA1O43805 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
SSNA1O43805 CROCCP3-202ENST00000420820 1947 ntBASIC16.84■□□□□ 0.29
SSNA1O43805 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC16.84■□□□□ 0.29
SSNA1O43805 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SSNA1O43805 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
SSNA1O43805 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SSNA1O43805 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SSNA1O43805 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.84■□□□□ 0.29
SSNA1O43805 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SSNA1O43805 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SSNA1O43805 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.29
SSNA1O43805 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SSNA1O43805 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SSNA1O43805 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SSNA1O43805 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SSNA1O43805 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
SSNA1O43805 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SSNA1O43805 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC16.83■□□□□ 0.28
SSNA1O43805 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SSNA1O43805 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC16.83■□□□□ 0.28
SSNA1O43805 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
SSNA1O43805 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC16.83■□□□□ 0.28
SSNA1O43805 HES6-204ENST00000409182 863 ntTSL 2 BASIC16.83■□□□□ 0.28
SSNA1O43805 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
SSNA1O43805 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SSNA1O43805 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
SSNA1O43805 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SSNA1O43805 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC16.83■□□□□ 0.28
SSNA1O43805 TK2-216ENST00000564917 1156 ntTSL 3 BASIC16.83■□□□□ 0.28
SSNA1O43805 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.83■□□□□ 0.28
SSNA1O43805 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC16.83■□□□□ 0.28
SSNA1O43805 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
SSNA1O43805 AL117332.1-201ENST00000622628 974 ntBASIC16.83■□□□□ 0.28
SSNA1O43805 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
SSNA1O43805 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
SSNA1O43805 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.83■□□□□ 0.28
SSNA1O43805 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SSNA1O43805 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
SSNA1O43805 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC16.82■□□□□ 0.28
SSNA1O43805 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SSNA1O43805 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
SSNA1O43805 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC16.82■□□□□ 0.28
SSNA1O43805 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SSNA1O43805 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SSNA1O43805 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SSNA1O43805 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SSNA1O43805 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SSNA1O43805 TFPT-201ENST00000391757 774 ntTSL 5 BASIC16.82■□□□□ 0.28
SSNA1O43805 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SSNA1O43805 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC16.82■□□□□ 0.28
SSNA1O43805 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
SSNA1O43805 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.82■□□□□ 0.28
SSNA1O43805 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SSNA1O43805 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SSNA1O43805 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC16.82■□□□□ 0.28
SSNA1O43805 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.82■□□□□ 0.28
SSNA1O43805 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.82■□□□□ 0.28
SSNA1O43805 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SSNA1O43805 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SSNA1O43805 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SSNA1O43805 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.82■□□□□ 0.28
SSNA1O43805 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
SSNA1O43805 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
SSNA1O43805 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
SSNA1O43805 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
SSNA1O43805 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
SSNA1O43805 TP73-202ENST00000354437 2140 ntTSL 5 BASIC16.81■□□□□ 0.28
SSNA1O43805 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SSNA1O43805 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.81■□□□□ 0.28
SSNA1O43805 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SSNA1O43805 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC16.81■□□□□ 0.28
SSNA1O43805 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC16.81■□□□□ 0.28
SSNA1O43805 MTDHP2-201ENST00000601468 714 ntBASIC16.81■□□□□ 0.28
SSNA1O43805 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
SSNA1O43805 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SSNA1O43805 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC16.81■□□□□ 0.28
SSNA1O43805 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
SSNA1O43805 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
SSNA1O43805 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms