Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.86■□□□□ 0.61
PCDH17O14917 AC069544.1-201ENST00000609399 999 ntBASIC18.86■□□□□ 0.61
PCDH17O14917 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDH17O14917 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.85■□□□□ 0.61
PCDH17O14917 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PCDH17O14917 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDH17O14917 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.85■□□□□ 0.61
PCDH17O14917 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDH17O14917 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
PCDH17O14917 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDH17O14917 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDH17O14917 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.85■□□□□ 0.61
PCDH17O14917 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.85■□□□□ 0.61
PCDH17O14917 UBE2SP1-201ENST00000450587 669 ntBASIC18.85■□□□□ 0.61
PCDH17O14917 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
PCDH17O14917 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PCDH17O14917 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC18.85■□□□□ 0.61
PCDH17O14917 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.85■□□□□ 0.61
PCDH17O14917 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
PCDH17O14917 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
PCDH17O14917 RN7SL471P-201ENST00000580476 299 ntBASIC18.85■□□□□ 0.61
PCDH17O14917 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.85■□□□□ 0.61
PCDH17O14917 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PCDH17O14917 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.85■□□□□ 0.61
PCDH17O14917 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDH17O14917 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PCDH17O14917 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDH17O14917 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDH17O14917 AC092720.2-201ENST00000602388 1665 ntBASIC18.85■□□□□ 0.61
PCDH17O14917 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
PCDH17O14917 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDH17O14917 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDH17O14917 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PCDH17O14917 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDH17O14917 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.84■□□□□ 0.61
PCDH17O14917 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.84■□□□□ 0.61
PCDH17O14917 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
PCDH17O14917 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.84■□□□□ 0.61
PCDH17O14917 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDH17O14917 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PCDH17O14917 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDH17O14917 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDH17O14917 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PCDH17O14917 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PCDH17O14917 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.84■□□□□ 0.61
PCDH17O14917 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDH17O14917 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.84■□□□□ 0.61
PCDH17O14917 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC18.84■□□□□ 0.61
PCDH17O14917 AL158047.1-201ENST00000445918 881 ntBASIC18.84■□□□□ 0.61
PCDH17O14917 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.84■□□□□ 0.61
PCDH17O14917 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
PCDH17O14917 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDH17O14917 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.84■□□□□ 0.61
PCDH17O14917 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PCDH17O14917 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDH17O14917 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDH17O14917 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
PCDH17O14917 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.84■□□□□ 0.61
PCDH17O14917 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
PCDH17O14917 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PCDH17O14917 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PCDH17O14917 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
PCDH17O14917 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PCDH17O14917 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PCDH17O14917 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCDH17O14917 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCDH17O14917 HLA-G-202ENST00000376815 851 ntBASIC18.83■□□□□ 0.6
PCDH17O14917 HLA-G-203ENST00000376818 1127 ntBASIC18.83■□□□□ 0.6
PCDH17O14917 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18.83■□□□□ 0.6
PCDH17O14917 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.83■□□□□ 0.6
PCDH17O14917 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PCDH17O14917 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PCDH17O14917 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.83■□□□□ 0.6
PCDH17O14917 ARL16-209ENST00000573715 763 ntTSL 3 BASIC18.83■□□□□ 0.6
PCDH17O14917 ARL16-211ENST00000576135 694 ntTSL 3 BASIC18.83■□□□□ 0.6
PCDH17O14917 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCDH17O14917 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCDH17O14917 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.83■□□□□ 0.6
PCDH17O14917 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCDH17O14917 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCDH17O14917 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PCDH17O14917 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.82■□□□□ 0.6
PCDH17O14917 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
PCDH17O14917 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH17O14917 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH17O14917 TCF3P1-201ENST00000423021 1937 ntBASIC18.82■□□□□ 0.6
PCDH17O14917 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
PCDH17O14917 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH17O14917 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH17O14917 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
PCDH17O14917 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.82■□□□□ 0.6
PCDH17O14917 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC18.82■□□□□ 0.6
PCDH17O14917 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.82■□□□□ 0.6
PCDH17O14917 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH17O14917 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH17O14917 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.82■□□□□ 0.6
PCDH17O14917 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH17O14917 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PCDH17O14917 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.82■□□□□ 0.6
PCDH17O14917 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms