Protein–RNA interactions for Protein: O00299

CLIC1, Chloride intracellular channel protein 1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1O00299 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLIC1O00299 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CLIC1O00299 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLIC1O00299 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLIC1O00299 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CLIC1O00299 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
CLIC1O00299 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CLIC1O00299 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.62■□□□□ 0.57
CLIC1O00299 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.62■□□□□ 0.57
CLIC1O00299 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.62■□□□□ 0.57
CLIC1O00299 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLIC1O00299 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLIC1O00299 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.62■□□□□ 0.57
CLIC1O00299 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLIC1O00299 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLIC1O00299 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.62■□□□□ 0.57
CLIC1O00299 AC011767.1-201ENST00000617410 1153 ntBASIC18.62■□□□□ 0.57
CLIC1O00299 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CLIC1O00299 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.62■□□□□ 0.57
CLIC1O00299 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CLIC1O00299 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.62■□□□□ 0.57
CLIC1O00299 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLIC1O00299 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLIC1O00299 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CLIC1O00299 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLIC1O00299 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLIC1O00299 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLIC1O00299 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLIC1O00299 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CLIC1O00299 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CLIC1O00299 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.61■□□□□ 0.57
CLIC1O00299 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
CLIC1O00299 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CLIC1O00299 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLIC1O00299 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLIC1O00299 PHGDH-210ENST00000641115 1638 ntBASIC18.61■□□□□ 0.57
CLIC1O00299 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.61■□□□□ 0.57
CLIC1O00299 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.61■□□□□ 0.57
CLIC1O00299 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.61■□□□□ 0.57
CLIC1O00299 AL355472.2-201ENST00000422958 438 ntBASIC18.61■□□□□ 0.57
CLIC1O00299 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.61■□□□□ 0.57
CLIC1O00299 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.61■□□□□ 0.57
CLIC1O00299 AC008694.1-202ENST00000636953 945 ntBASIC18.61■□□□□ 0.57
CLIC1O00299 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLIC1O00299 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.61■□□□□ 0.57
CLIC1O00299 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLIC1O00299 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLIC1O00299 AC120498.9-201ENST00000339021 3867 ntBASIC18.61■□□□□ 0.57
CLIC1O00299 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.61■□□□□ 0.57
CLIC1O00299 AL032819.2-201ENST00000624543 2162 ntBASIC18.61■□□□□ 0.57
CLIC1O00299 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
CLIC1O00299 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLIC1O00299 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CLIC1O00299 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLIC1O00299 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLIC1O00299 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.6■□□□□ 0.57
CLIC1O00299 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLIC1O00299 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CLIC1O00299 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLIC1O00299 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLIC1O00299 CYP2T1P-201ENST00000432607 1285 ntBASIC18.6■□□□□ 0.57
CLIC1O00299 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLIC1O00299 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.6■□□□□ 0.57
CLIC1O00299 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.6■□□□□ 0.57
CLIC1O00299 AC004408.2-201ENST00000623613 2777 ntBASIC18.6■□□□□ 0.57
CLIC1O00299 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLIC1O00299 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLIC1O00299 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
CLIC1O00299 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CLIC1O00299 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLIC1O00299 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CLIC1O00299 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.6■□□□□ 0.57
CLIC1O00299 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLIC1O00299 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLIC1O00299 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CLIC1O00299 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CLIC1O00299 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.59■□□□□ 0.57
CLIC1O00299 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLIC1O00299 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.59■□□□□ 0.57
CLIC1O00299 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.59■□□□□ 0.57
CLIC1O00299 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.59■□□□□ 0.57
CLIC1O00299 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLIC1O00299 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLIC1O00299 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLIC1O00299 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.59■□□□□ 0.57
CLIC1O00299 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC18.59■□□□□ 0.57
CLIC1O00299 AC006015.1-201ENST00000429970 570 ntBASIC18.59■□□□□ 0.57
CLIC1O00299 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
CLIC1O00299 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.59■□□□□ 0.57
CLIC1O00299 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC18.59■□□□□ 0.57
CLIC1O00299 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC18.59■□□□□ 0.57
CLIC1O00299 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CLIC1O00299 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLIC1O00299 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CLIC1O00299 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.59■□□□□ 0.57
CLIC1O00299 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.59■□□□□ 0.57
CLIC1O00299 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLIC1O00299 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLIC1O00299 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CLIC1O00299 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms