Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CFAP99D6REC4 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CFAP99D6REC4 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.68■□□□□ 0.74
CFAP99D6REC4 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CFAP99D6REC4 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC19.68■□□□□ 0.74
CFAP99D6REC4 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.68■□□□□ 0.74
CFAP99D6REC4 UNC93B4-201ENST00000505679 747 ntBASIC19.68■□□□□ 0.74
CFAP99D6REC4 DENND3-207ENST00000518347 850 ntTSL 2 BASIC19.68■□□□□ 0.74
CFAP99D6REC4 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
CFAP99D6REC4 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.68■□□□□ 0.74
CFAP99D6REC4 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.68■□□□□ 0.74
CFAP99D6REC4 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.68■□□□□ 0.74
CFAP99D6REC4 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.68■□□□□ 0.74
CFAP99D6REC4 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
CFAP99D6REC4 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CFAP99D6REC4 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CFAP99D6REC4 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CFAP99D6REC4 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CFAP99D6REC4 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.67■□□□□ 0.74
CFAP99D6REC4 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.67■□□□□ 0.74
CFAP99D6REC4 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CFAP99D6REC4 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CFAP99D6REC4 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CFAP99D6REC4 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CFAP99D6REC4 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.67■□□□□ 0.74
CFAP99D6REC4 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CFAP99D6REC4 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
CFAP99D6REC4 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CFAP99D6REC4 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.67■□□□□ 0.74
CFAP99D6REC4 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CFAP99D6REC4 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.67■□□□□ 0.74
CFAP99D6REC4 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC19.67■□□□□ 0.74
CFAP99D6REC4 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
CFAP99D6REC4 AP003097.1-201ENST00000530657 1135 ntBASIC19.67■□□□□ 0.74
CFAP99D6REC4 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.67■□□□□ 0.74
CFAP99D6REC4 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
CFAP99D6REC4 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.67■□□□□ 0.74
CFAP99D6REC4 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.67■□□□□ 0.74
CFAP99D6REC4 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
CFAP99D6REC4 AC008687.6-201ENST00000596318 630 ntBASIC19.67■□□□□ 0.74
CFAP99D6REC4 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.67■□□□□ 0.74
CFAP99D6REC4 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CFAP99D6REC4 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CFAP99D6REC4 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CFAP99D6REC4 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CFAP99D6REC4 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CFAP99D6REC4 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CFAP99D6REC4 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
CFAP99D6REC4 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CFAP99D6REC4 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.67■□□□□ 0.74
CFAP99D6REC4 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CFAP99D6REC4 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.66■□□□□ 0.74
CFAP99D6REC4 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CFAP99D6REC4 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
CFAP99D6REC4 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CFAP99D6REC4 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CFAP99D6REC4 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CFAP99D6REC4 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC19.66■□□□□ 0.74
CFAP99D6REC4 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CFAP99D6REC4 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.66■□□□□ 0.74
CFAP99D6REC4 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.66■□□□□ 0.74
CFAP99D6REC4 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.66■□□□□ 0.74
CFAP99D6REC4 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.66■□□□□ 0.74
CFAP99D6REC4 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CFAP99D6REC4 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CFAP99D6REC4 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CFAP99D6REC4 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CFAP99D6REC4 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CFAP99D6REC4 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CFAP99D6REC4 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CFAP99D6REC4 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.65■□□□□ 0.74
CFAP99D6REC4 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CFAP99D6REC4 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.65■□□□□ 0.74
CFAP99D6REC4 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CFAP99D6REC4 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CFAP99D6REC4 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.65■□□□□ 0.74
CFAP99D6REC4 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.65■□□□□ 0.74
CFAP99D6REC4 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.65■□□□□ 0.74
CFAP99D6REC4 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.65■□□□□ 0.74
CFAP99D6REC4 AC120498.8-201ENST00000614275 531 ntBASIC19.65■□□□□ 0.74
CFAP99D6REC4 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CFAP99D6REC4 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CFAP99D6REC4 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CFAP99D6REC4 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CFAP99D6REC4 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CFAP99D6REC4 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CFAP99D6REC4 PHGDH-210ENST00000641115 1638 ntBASIC19.65■□□□□ 0.74
CFAP99D6REC4 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.65■□□□□ 0.74
CFAP99D6REC4 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CFAP99D6REC4 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.64■□□□□ 0.74
CFAP99D6REC4 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
CFAP99D6REC4 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.64■□□□□ 0.74
CFAP99D6REC4 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CFAP99D6REC4 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CFAP99D6REC4 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
CFAP99D6REC4 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CFAP99D6REC4 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
CFAP99D6REC4 RPS2P52-201ENST00000469610 820 ntBASIC19.64■□□□□ 0.73
CFAP99D6REC4 AC026366.1-201ENST00000488803 879 ntBASIC19.64■□□□□ 0.73
CFAP99D6REC4 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms