Protein–RNA interactions for Protein: A6NCQ9

RNF222, RING finger protein 222, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF222A6NCQ9 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RNF222A6NCQ9 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RNF222A6NCQ9 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RNF222A6NCQ9 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.07■□□□□ 0.16
RNF222A6NCQ9 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.07■□□□□ 0.16
RNF222A6NCQ9 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
RNF222A6NCQ9 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
RNF222A6NCQ9 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RNF222A6NCQ9 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RNF222A6NCQ9 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RNF222A6NCQ9 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RNF222A6NCQ9 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC16.07■□□□□ 0.16
RNF222A6NCQ9 RNF146-205ENST00000477776 762 ntTSL 3 BASIC16.07■□□□□ 0.16
RNF222A6NCQ9 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC16.07■□□□□ 0.16
RNF222A6NCQ9 MIR4787-201ENST00000607364 84 ntBASIC16.07■□□□□ 0.16
RNF222A6NCQ9 MIR6724-1-201ENST00000616420 92 ntBASIC16.07■□□□□ 0.16
RNF222A6NCQ9 MIR6724-2-201ENST00000616483 92 ntBASIC16.07■□□□□ 0.16
RNF222A6NCQ9 MIR6724-4-201ENST00000617390 92 ntBASIC16.07■□□□□ 0.16
RNF222A6NCQ9 MIR6724-3-201ENST00000622482 92 ntBASIC16.07■□□□□ 0.16
RNF222A6NCQ9 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RNF222A6NCQ9 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
RNF222A6NCQ9 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
RNF222A6NCQ9 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC16.07■□□□□ 0.16
RNF222A6NCQ9 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
RNF222A6NCQ9 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RNF222A6NCQ9 AC012313.1-201ENST00000593393 3059 ntBASIC16.07■□□□□ 0.16
RNF222A6NCQ9 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
RNF222A6NCQ9 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
RNF222A6NCQ9 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF222A6NCQ9 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF222A6NCQ9 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.06■□□□□ 0.16
RNF222A6NCQ9 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RNF222A6NCQ9 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RNF222A6NCQ9 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RNF222A6NCQ9 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
RNF222A6NCQ9 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF222A6NCQ9 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF222A6NCQ9 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RNF222A6NCQ9 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC16.06■□□□□ 0.16
RNF222A6NCQ9 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC16.06■□□□□ 0.16
RNF222A6NCQ9 MKRN4P-201ENST00000444706 1521 ntBASIC16.06■□□□□ 0.16
RNF222A6NCQ9 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF222A6NCQ9 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
RNF222A6NCQ9 HES6-206ENST00000409574 738 ntTSL 2 BASIC16.06■□□□□ 0.16
RNF222A6NCQ9 TSPY9P-201ENST00000440215 945 ntBASIC16.06■□□□□ 0.16
RNF222A6NCQ9 TSPY11P-201ENST00000442607 1045 ntBASIC16.06■□□□□ 0.16
RNF222A6NCQ9 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC16.06■□□□□ 0.16
RNF222A6NCQ9 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC16.06■□□□□ 0.16
RNF222A6NCQ9 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC16.06■□□□□ 0.16
RNF222A6NCQ9 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF222A6NCQ9 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RNF222A6NCQ9 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
RNF222A6NCQ9 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.06■□□□□ 0.16
RNF222A6NCQ9 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF222A6NCQ9 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF222A6NCQ9 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
RNF222A6NCQ9 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
RNF222A6NCQ9 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF222A6NCQ9 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.06■□□□□ 0.16
RNF222A6NCQ9 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.06■□□□□ 0.16
RNF222A6NCQ9 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF222A6NCQ9 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC16.05■□□□□ 0.16
RNF222A6NCQ9 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
RNF222A6NCQ9 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF222A6NCQ9 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
RNF222A6NCQ9 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.05■□□□□ 0.16
RNF222A6NCQ9 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RNF222A6NCQ9 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.05■□□□□ 0.16
RNF222A6NCQ9 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF222A6NCQ9 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF222A6NCQ9 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
RNF222A6NCQ9 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC16.05■□□□□ 0.16
RNF222A6NCQ9 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC16.05■□□□□ 0.16
RNF222A6NCQ9 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF222A6NCQ9 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RNF222A6NCQ9 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF222A6NCQ9 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
RNF222A6NCQ9 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF222A6NCQ9 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.05■□□□□ 0.16
RNF222A6NCQ9 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RNF222A6NCQ9 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC16.05■□□□□ 0.16
RNF222A6NCQ9 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
RNF222A6NCQ9 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC16.05■□□□□ 0.16
RNF222A6NCQ9 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
RNF222A6NCQ9 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF222A6NCQ9 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RNF222A6NCQ9 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF222A6NCQ9 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF222A6NCQ9 AC093525.10-201ENST00000625130 1569 ntBASIC16.04■□□□□ 0.16
RNF222A6NCQ9 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
RNF222A6NCQ9 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC16.04■□□□□ 0.16
RNF222A6NCQ9 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RNF222A6NCQ9 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
RNF222A6NCQ9 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC16.04■□□□□ 0.16
RNF222A6NCQ9 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RNF222A6NCQ9 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RNF222A6NCQ9 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
RNF222A6NCQ9 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF222A6NCQ9 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF222A6NCQ9 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms