Protein–RNA interactions for Protein: A0A0J9YXQ4

PNMA6E, Paraneoplastic antigen Ma6E, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA6EA0A0J9YXQ4 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
PNMA6EA0A0J9YXQ4 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC24.56■■□□□ 1.52
PNMA6EA0A0J9YXQ4 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
PNMA6EA0A0J9YXQ4 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC24.55■■□□□ 1.52
PNMA6EA0A0J9YXQ4 GCSHP5-201ENST00000443090 522 ntBASIC24.55■■□□□ 1.52
PNMA6EA0A0J9YXQ4 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC24.55■■□□□ 1.52
PNMA6EA0A0J9YXQ4 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC24.55■■□□□ 1.52
PNMA6EA0A0J9YXQ4 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC24.55■■□□□ 1.52
PNMA6EA0A0J9YXQ4 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC24.55■■□□□ 1.52
PNMA6EA0A0J9YXQ4 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC24.55■■□□□ 1.52
PNMA6EA0A0J9YXQ4 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
PNMA6EA0A0J9YXQ4 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC24.55■■□□□ 1.52
PNMA6EA0A0J9YXQ4 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC24.55■■□□□ 1.52
PNMA6EA0A0J9YXQ4 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
PNMA6EA0A0J9YXQ4 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
PNMA6EA0A0J9YXQ4 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC24.55■■□□□ 1.52
PNMA6EA0A0J9YXQ4 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC24.54■■□□□ 1.52
PNMA6EA0A0J9YXQ4 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC24.54■■□□□ 1.52
PNMA6EA0A0J9YXQ4 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC24.54■■□□□ 1.52
PNMA6EA0A0J9YXQ4 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC24.54■■□□□ 1.52
PNMA6EA0A0J9YXQ4 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC24.54■■□□□ 1.52
PNMA6EA0A0J9YXQ4 TREX2-204ENST00000370212 861 ntTSL 5 BASIC24.54■■□□□ 1.52
PNMA6EA0A0J9YXQ4 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC24.54■■□□□ 1.52
PNMA6EA0A0J9YXQ4 ISG20-202ENST00000379224 540 ntTSL 3 BASIC24.54■■□□□ 1.52
PNMA6EA0A0J9YXQ4 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC24.54■■□□□ 1.52
PNMA6EA0A0J9YXQ4 IRX5-204ENST00000560154 879 ntTSL 5 BASIC24.54■■□□□ 1.52
PNMA6EA0A0J9YXQ4 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
PNMA6EA0A0J9YXQ4 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC24.54■■□□□ 1.52
PNMA6EA0A0J9YXQ4 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC24.54■■□□□ 1.52
PNMA6EA0A0J9YXQ4 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
PNMA6EA0A0J9YXQ4 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
PNMA6EA0A0J9YXQ4 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC24.54■■□□□ 1.52
PNMA6EA0A0J9YXQ4 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
PNMA6EA0A0J9YXQ4 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
PNMA6EA0A0J9YXQ4 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
PNMA6EA0A0J9YXQ4 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
PNMA6EA0A0J9YXQ4 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
PNMA6EA0A0J9YXQ4 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC24.53■■□□□ 1.52
PNMA6EA0A0J9YXQ4 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC24.53■■□□□ 1.52
PNMA6EA0A0J9YXQ4 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
PNMA6EA0A0J9YXQ4 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC24.53■■□□□ 1.52
PNMA6EA0A0J9YXQ4 KRASP1-201ENST00000407852 552 ntBASIC24.53■■□□□ 1.52
PNMA6EA0A0J9YXQ4 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
PNMA6EA0A0J9YXQ4 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC24.53■■□□□ 1.52
PNMA6EA0A0J9YXQ4 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC24.53■■□□□ 1.52
PNMA6EA0A0J9YXQ4 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
PNMA6EA0A0J9YXQ4 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC24.53■■□□□ 1.52
PNMA6EA0A0J9YXQ4 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC24.53■■□□□ 1.52
PNMA6EA0A0J9YXQ4 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
PNMA6EA0A0J9YXQ4 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
PNMA6EA0A0J9YXQ4 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
PNMA6EA0A0J9YXQ4 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
PNMA6EA0A0J9YXQ4 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC24.52■■□□□ 1.52
PNMA6EA0A0J9YXQ4 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC24.52■■□□□ 1.52
PNMA6EA0A0J9YXQ4 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
PNMA6EA0A0J9YXQ4 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
PNMA6EA0A0J9YXQ4 RNF121-214ENST00000533380 870 ntTSL 3 BASIC24.52■■□□□ 1.52
PNMA6EA0A0J9YXQ4 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
PNMA6EA0A0J9YXQ4 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
PNMA6EA0A0J9YXQ4 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC24.52■■□□□ 1.52
PNMA6EA0A0J9YXQ4 MED17-221ENST00000639724 2317 ntTSL 5 BASIC24.52■■□□□ 1.52
PNMA6EA0A0J9YXQ4 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
PNMA6EA0A0J9YXQ4 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
PNMA6EA0A0J9YXQ4 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
PNMA6EA0A0J9YXQ4 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
PNMA6EA0A0J9YXQ4 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
PNMA6EA0A0J9YXQ4 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
PNMA6EA0A0J9YXQ4 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC24.51■■□□□ 1.51
PNMA6EA0A0J9YXQ4 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
PNMA6EA0A0J9YXQ4 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
PNMA6EA0A0J9YXQ4 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
PNMA6EA0A0J9YXQ4 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC24.51■■□□□ 1.51
PNMA6EA0A0J9YXQ4 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC24.51■■□□□ 1.51
PNMA6EA0A0J9YXQ4 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
PNMA6EA0A0J9YXQ4 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC24.51■■□□□ 1.51
PNMA6EA0A0J9YXQ4 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC24.51■■□□□ 1.51
PNMA6EA0A0J9YXQ4 AC239809.2-201ENST00000415381 517 ntBASIC24.51■■□□□ 1.51
PNMA6EA0A0J9YXQ4 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
PNMA6EA0A0J9YXQ4 AC133681.1-201ENST00000465482 601 ntBASIC24.51■■□□□ 1.51
PNMA6EA0A0J9YXQ4 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC24.51■■□□□ 1.51
PNMA6EA0A0J9YXQ4 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC24.51■■□□□ 1.51
PNMA6EA0A0J9YXQ4 AC142381.4-202ENST00000563973 229 ntBASIC24.51■■□□□ 1.51
PNMA6EA0A0J9YXQ4 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC24.51■■□□□ 1.51
PNMA6EA0A0J9YXQ4 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC24.51■■□□□ 1.51
PNMA6EA0A0J9YXQ4 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
PNMA6EA0A0J9YXQ4 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
PNMA6EA0A0J9YXQ4 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC24.51■■□□□ 1.51
PNMA6EA0A0J9YXQ4 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC24.51■■□□□ 1.51
PNMA6EA0A0J9YXQ4 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC24.51■■□□□ 1.51
PNMA6EA0A0J9YXQ4 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC24.51■■□□□ 1.51
PNMA6EA0A0J9YXQ4 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
PNMA6EA0A0J9YXQ4 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC24.51■■□□□ 1.51
PNMA6EA0A0J9YXQ4 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC24.51■■□□□ 1.51
PNMA6EA0A0J9YXQ4 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC24.51■■□□□ 1.51
PNMA6EA0A0J9YXQ4 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC24.51■■□□□ 1.51
PNMA6EA0A0J9YXQ4 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC24.51■■□□□ 1.51
PNMA6EA0A0J9YXQ4 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC24.5■■□□□ 1.51
PNMA6EA0A0J9YXQ4 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC24.5■■□□□ 1.51
PNMA6EA0A0J9YXQ4 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
PNMA6EA0A0J9YXQ4 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC24.5■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms