Protein–RNA interactions for Protein: A0A0B4J273

TRAV34, T-cell receptor alpha variable 34 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV34A0A0B4J273 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
TRAV34A0A0B4J273 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV34A0A0B4J273 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV34A0A0B4J273 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV34A0A0B4J273 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV34A0A0B4J273 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV34A0A0B4J273 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV34A0A0B4J273 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV34A0A0B4J273 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV34A0A0B4J273 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC15.25■□□□□ 0.03
TRAV34A0A0B4J273 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV34A0A0B4J273 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV34A0A0B4J273 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV34A0A0B4J273 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC15.25■□□□□ 0.03
TRAV34A0A0B4J273 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
TRAV34A0A0B4J273 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC15.25■□□□□ 0.03
TRAV34A0A0B4J273 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV34A0A0B4J273 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV34A0A0B4J273 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
TRAV34A0A0B4J273 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV34A0A0B4J273 AC024257.2-201ENST00000549699 147 ntBASIC15.25■□□□□ 0.03
TRAV34A0A0B4J273 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC15.25■□□□□ 0.03
TRAV34A0A0B4J273 TRIR-205ENST00000592273 783 ntTSL 3 BASIC15.25■□□□□ 0.03
TRAV34A0A0B4J273 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV34A0A0B4J273 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC15.25■□□□□ 0.03
TRAV34A0A0B4J273 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV34A0A0B4J273 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV34A0A0B4J273 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV34A0A0B4J273 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC15.25■□□□□ 0.03
TRAV34A0A0B4J273 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
TRAV34A0A0B4J273 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
TRAV34A0A0B4J273 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV34A0A0B4J273 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC15.25■□□□□ 0.03
TRAV34A0A0B4J273 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV34A0A0B4J273 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV34A0A0B4J273 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV34A0A0B4J273 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
TRAV34A0A0B4J273 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC15.25■□□□□ 0.03
TRAV34A0A0B4J273 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV34A0A0B4J273 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC15.25■□□□□ 0.03
TRAV34A0A0B4J273 PTGES2-AS1-201ENST00000443493 2100 ntBASIC15.25■□□□□ 0.03
TRAV34A0A0B4J273 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV34A0A0B4J273 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
TRAV34A0A0B4J273 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV34A0A0B4J273 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC15.24■□□□□ 0.03
TRAV34A0A0B4J273 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
TRAV34A0A0B4J273 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC15.24■□□□□ 0.03
TRAV34A0A0B4J273 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
TRAV34A0A0B4J273 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
TRAV34A0A0B4J273 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV34A0A0B4J273 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV34A0A0B4J273 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC15.24■□□□□ 0.03
TRAV34A0A0B4J273 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV34A0A0B4J273 AC099791.1-201ENST00000416440 715 ntBASIC15.24■□□□□ 0.03
TRAV34A0A0B4J273 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV34A0A0B4J273 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC15.24■□□□□ 0.03
TRAV34A0A0B4J273 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC15.24■□□□□ 0.03
TRAV34A0A0B4J273 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC15.24■□□□□ 0.03
TRAV34A0A0B4J273 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC15.24■□□□□ 0.03
TRAV34A0A0B4J273 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV34A0A0B4J273 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV34A0A0B4J273 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV34A0A0B4J273 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC15.24■□□□□ 0.03
TRAV34A0A0B4J273 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV34A0A0B4J273 Z82202.1-201ENST00000623446 1880 ntBASIC15.24■□□□□ 0.03
TRAV34A0A0B4J273 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC15.24■□□□□ 0.03
TRAV34A0A0B4J273 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV34A0A0B4J273 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
TRAV34A0A0B4J273 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV34A0A0B4J273 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV34A0A0B4J273 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC15.23■□□□□ 0.03
TRAV34A0A0B4J273 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV34A0A0B4J273 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV34A0A0B4J273 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC15.23■□□□□ 0.03
TRAV34A0A0B4J273 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV34A0A0B4J273 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC15.23■□□□□ 0.03
TRAV34A0A0B4J273 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV34A0A0B4J273 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
TRAV34A0A0B4J273 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC15.23■□□□□ 0.03
TRAV34A0A0B4J273 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV34A0A0B4J273 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV34A0A0B4J273 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV34A0A0B4J273 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV34A0A0B4J273 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC15.23■□□□□ 0.03
TRAV34A0A0B4J273 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV34A0A0B4J273 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV34A0A0B4J273 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC15.23■□□□□ 0.03
TRAV34A0A0B4J273 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC15.23■□□□□ 0.03
TRAV34A0A0B4J273 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
TRAV34A0A0B4J273 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV34A0A0B4J273 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV34A0A0B4J273 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV34A0A0B4J273 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV34A0A0B4J273 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV34A0A0B4J273 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV34A0A0B4J273 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
TRAV34A0A0B4J273 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV34A0A0B4J273 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV34A0A0B4J273 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC15.22■□□□□ 0.03
TRAV34A0A0B4J273 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms