Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC15.34■□□□□ 0.05
TRAV5A0A0B4J249 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC15.34■□□□□ 0.05
TRAV5A0A0B4J249 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV5A0A0B4J249 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV5A0A0B4J249 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
TRAV5A0A0B4J249 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV5A0A0B4J249 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV5A0A0B4J249 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC15.34■□□□□ 0.05
TRAV5A0A0B4J249 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC15.34■□□□□ 0.05
TRAV5A0A0B4J249 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV5A0A0B4J249 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV5A0A0B4J249 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
TRAV5A0A0B4J249 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
TRAV5A0A0B4J249 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV5A0A0B4J249 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV5A0A0B4J249 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV5A0A0B4J249 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV5A0A0B4J249 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
TRAV5A0A0B4J249 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
TRAV5A0A0B4J249 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRAV5A0A0B4J249 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRAV5A0A0B4J249 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRAV5A0A0B4J249 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRAV5A0A0B4J249 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC15.33■□□□□ 0.05
TRAV5A0A0B4J249 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV5A0A0B4J249 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
TRAV5A0A0B4J249 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
TRAV5A0A0B4J249 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV5A0A0B4J249 AK1-201ENST00000223836 736 ntTSL 3 BASIC15.33■□□□□ 0.04
TRAV5A0A0B4J249 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV5A0A0B4J249 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV5A0A0B4J249 JTB-203ENST00000368589 1216 ntTSL 2 BASIC15.33■□□□□ 0.04
TRAV5A0A0B4J249 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV5A0A0B4J249 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
TRAV5A0A0B4J249 AC005837.3-201ENST00000612163 286 ntBASIC15.33■□□□□ 0.04
TRAV5A0A0B4J249 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
TRAV5A0A0B4J249 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC15.33■□□□□ 0.04
TRAV5A0A0B4J249 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV5A0A0B4J249 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV5A0A0B4J249 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV5A0A0B4J249 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC15.33■□□□□ 0.04
TRAV5A0A0B4J249 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV5A0A0B4J249 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC15.33■□□□□ 0.04
TRAV5A0A0B4J249 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC15.33■□□□□ 0.04
TRAV5A0A0B4J249 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV5A0A0B4J249 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV5A0A0B4J249 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV5A0A0B4J249 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV5A0A0B4J249 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV5A0A0B4J249 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV5A0A0B4J249 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV5A0A0B4J249 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC15.32■□□□□ 0.04
TRAV5A0A0B4J249 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV5A0A0B4J249 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV5A0A0B4J249 PTBP1P-201ENST00000554374 1601 ntBASIC15.32■□□□□ 0.04
TRAV5A0A0B4J249 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC15.32■□□□□ 0.04
TRAV5A0A0B4J249 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV5A0A0B4J249 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV5A0A0B4J249 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC15.32■□□□□ 0.04
TRAV5A0A0B4J249 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV5A0A0B4J249 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV5A0A0B4J249 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV5A0A0B4J249 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV5A0A0B4J249 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV5A0A0B4J249 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV5A0A0B4J249 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV5A0A0B4J249 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV5A0A0B4J249 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV5A0A0B4J249 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV5A0A0B4J249 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV5A0A0B4J249 AC123595.1-201ENST00000440769 1046 ntBASIC15.32■□□□□ 0.04
TRAV5A0A0B4J249 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC15.32■□□□□ 0.04
TRAV5A0A0B4J249 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC15.32■□□□□ 0.04
TRAV5A0A0B4J249 KRT18P14-201ENST00000534205 1250 ntBASIC15.32■□□□□ 0.04
TRAV5A0A0B4J249 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV5A0A0B4J249 UBE2DNL-204ENST00000602536 740 ntBASIC15.32■□□□□ 0.04
TRAV5A0A0B4J249 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC15.32■□□□□ 0.04
TRAV5A0A0B4J249 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC15.32■□□□□ 0.04
TRAV5A0A0B4J249 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV5A0A0B4J249 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV5A0A0B4J249 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV5A0A0B4J249 KRT8P17-201ENST00000453110 1448 ntBASIC15.32■□□□□ 0.04
TRAV5A0A0B4J249 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC15.32■□□□□ 0.04
TRAV5A0A0B4J249 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV5A0A0B4J249 CYP21A1P-202ENST00000354927 1481 ntBASIC15.32■□□□□ 0.04
TRAV5A0A0B4J249 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV5A0A0B4J249 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC15.32■□□□□ 0.04
TRAV5A0A0B4J249 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV5A0A0B4J249 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV5A0A0B4J249 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV5A0A0B4J249 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV5A0A0B4J249 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV5A0A0B4J249 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
TRAV5A0A0B4J249 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC15.31■□□□□ 0.04
TRAV5A0A0B4J249 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV5A0A0B4J249 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV5A0A0B4J249 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC15.31■□□□□ 0.04
TRAV5A0A0B4J249 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV5A0A0B4J249 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
TRAV5A0A0B4J249 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms