Protein–RNA interactions for Protein: A0A0B4J245

TRAV12-1, T-cell receptor alpha variable 12-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-1A0A0B4J245 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC13.87□□□□□ -0.19
TRAV12-1A0A0B4J245 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
TRAV12-1A0A0B4J245 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV12-1A0A0B4J245 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV12-1A0A0B4J245 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC13.87□□□□□ -0.19
TRAV12-1A0A0B4J245 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC13.87□□□□□ -0.19
TRAV12-1A0A0B4J245 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV12-1A0A0B4J245 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV12-1A0A0B4J245 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV12-1A0A0B4J245 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC13.87□□□□□ -0.19
TRAV12-1A0A0B4J245 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
TRAV12-1A0A0B4J245 PRTG-204ENST00000561292 833 ntTSL 3 BASIC13.87□□□□□ -0.19
TRAV12-1A0A0B4J245 AL138724.1-201ENST00000606771 1088 ntBASIC13.87□□□□□ -0.19
TRAV12-1A0A0B4J245 RARRES2P11-201ENST00000635158 484 ntBASIC13.87□□□□□ -0.19
TRAV12-1A0A0B4J245 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
TRAV12-1A0A0B4J245 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV12-1A0A0B4J245 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV12-1A0A0B4J245 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
TRAV12-1A0A0B4J245 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
TRAV12-1A0A0B4J245 AC005224.4-201ENST00000583262 1652 ntBASIC13.87□□□□□ -0.19
TRAV12-1A0A0B4J245 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV12-1A0A0B4J245 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
TRAV12-1A0A0B4J245 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV12-1A0A0B4J245 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC13.87□□□□□ -0.19
TRAV12-1A0A0B4J245 AC018470.1-201ENST00000624790 3129 ntBASIC13.87□□□□□ -0.19
TRAV12-1A0A0B4J245 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV12-1A0A0B4J245 BICD1-207ENST00000551848 1962 ntBASIC13.87□□□□□ -0.19
TRAV12-1A0A0B4J245 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC13.87□□□□□ -0.19
TRAV12-1A0A0B4J245 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC13.87□□□□□ -0.19
TRAV12-1A0A0B4J245 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
TRAV12-1A0A0B4J245 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
TRAV12-1A0A0B4J245 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC13.86□□□□□ -0.19
TRAV12-1A0A0B4J245 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
TRAV12-1A0A0B4J245 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC13.86□□□□□ -0.19
TRAV12-1A0A0B4J245 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV12-1A0A0B4J245 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC13.86□□□□□ -0.19
TRAV12-1A0A0B4J245 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV12-1A0A0B4J245 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV12-1A0A0B4J245 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV12-1A0A0B4J245 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV12-1A0A0B4J245 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV12-1A0A0B4J245 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV12-1A0A0B4J245 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV12-1A0A0B4J245 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV12-1A0A0B4J245 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV12-1A0A0B4J245 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV12-1A0A0B4J245 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV12-1A0A0B4J245 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
TRAV12-1A0A0B4J245 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC13.86□□□□□ -0.19
TRAV12-1A0A0B4J245 SLC47A1P1-202ENST00000449666 945 ntBASIC13.86□□□□□ -0.19
TRAV12-1A0A0B4J245 AC245052.3-201ENST00000450182 901 ntBASIC13.86□□□□□ -0.19
TRAV12-1A0A0B4J245 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV12-1A0A0B4J245 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC13.86□□□□□ -0.19
TRAV12-1A0A0B4J245 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC13.86□□□□□ -0.19
TRAV12-1A0A0B4J245 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV12-1A0A0B4J245 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV12-1A0A0B4J245 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV12-1A0A0B4J245 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV12-1A0A0B4J245 AL354751.1-201ENST00000412768 1863 ntBASIC13.86□□□□□ -0.19
TRAV12-1A0A0B4J245 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV12-1A0A0B4J245 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV12-1A0A0B4J245 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV12-1A0A0B4J245 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV12-1A0A0B4J245 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
TRAV12-1A0A0B4J245 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV12-1A0A0B4J245 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
TRAV12-1A0A0B4J245 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV12-1A0A0B4J245 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV12-1A0A0B4J245 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
TRAV12-1A0A0B4J245 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV12-1A0A0B4J245 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC13.85□□□□□ -0.19
TRAV12-1A0A0B4J245 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
TRAV12-1A0A0B4J245 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC13.85□□□□□ -0.19
TRAV12-1A0A0B4J245 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV12-1A0A0B4J245 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV12-1A0A0B4J245 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV12-1A0A0B4J245 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC13.85□□□□□ -0.19
TRAV12-1A0A0B4J245 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
TRAV12-1A0A0B4J245 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC13.85□□□□□ -0.19
TRAV12-1A0A0B4J245 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV12-1A0A0B4J245 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC13.85□□□□□ -0.19
TRAV12-1A0A0B4J245 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV12-1A0A0B4J245 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC13.85□□□□□ -0.19
TRAV12-1A0A0B4J245 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV12-1A0A0B4J245 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV12-1A0A0B4J245 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV12-1A0A0B4J245 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV12-1A0A0B4J245 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV12-1A0A0B4J245 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV12-1A0A0B4J245 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV12-1A0A0B4J245 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV12-1A0A0B4J245 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV12-1A0A0B4J245 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV12-1A0A0B4J245 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV12-1A0A0B4J245 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV12-1A0A0B4J245 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV12-1A0A0B4J245 AL133373.2-201ENST00000623187 2828 ntBASIC13.85□□□□□ -0.19
TRAV12-1A0A0B4J245 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV12-1A0A0B4J245 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
TRAV12-1A0A0B4J245 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms