Protein–RNA interactions for Protein: A0A0B4J1Z2

IGKV1D-43, Immunoglobulin kappa variable 1D-43, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1D-43A0A0B4J1Z2 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
IGKV1D-43A0A0B4J1Z2 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
IGKV1D-43A0A0B4J1Z2 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.47■□□□□ 0.39
IGKV1D-43A0A0B4J1Z2 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC17.47■□□□□ 0.39
IGKV1D-43A0A0B4J1Z2 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.47■□□□□ 0.39
IGKV1D-43A0A0B4J1Z2 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
IGKV1D-43A0A0B4J1Z2 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
IGKV1D-43A0A0B4J1Z2 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
IGKV1D-43A0A0B4J1Z2 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
IGKV1D-43A0A0B4J1Z2 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
IGKV1D-43A0A0B4J1Z2 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC17.47■□□□□ 0.39
IGKV1D-43A0A0B4J1Z2 RER1-204ENST00000378518 522 ntTSL 3 BASIC17.47■□□□□ 0.39
IGKV1D-43A0A0B4J1Z2 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
IGKV1D-43A0A0B4J1Z2 AL355802.2-201ENST00000402069 882 ntBASIC17.47■□□□□ 0.39
IGKV1D-43A0A0B4J1Z2 AL390719.1-204ENST00000412397 1219 ntBASIC17.47■□□□□ 0.39
IGKV1D-43A0A0B4J1Z2 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC17.47■□□□□ 0.39
IGKV1D-43A0A0B4J1Z2 HLA-B-256ENST00000639848 1089 ntBASIC17.47■□□□□ 0.39
IGKV1D-43A0A0B4J1Z2 AC133041.1-202ENST00000642053 222 ntBASIC17.47■□□□□ 0.39
IGKV1D-43A0A0B4J1Z2 AC116351.2-201ENST00000606540 1585 ntBASIC17.47■□□□□ 0.39
IGKV1D-43A0A0B4J1Z2 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.47■□□□□ 0.39
IGKV1D-43A0A0B4J1Z2 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.47■□□□□ 0.39
IGKV1D-43A0A0B4J1Z2 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
IGKV1D-43A0A0B4J1Z2 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
IGKV1D-43A0A0B4J1Z2 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.47■□□□□ 0.39
IGKV1D-43A0A0B4J1Z2 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
IGKV1D-43A0A0B4J1Z2 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
IGKV1D-43A0A0B4J1Z2 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
IGKV1D-43A0A0B4J1Z2 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
IGKV1D-43A0A0B4J1Z2 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
IGKV1D-43A0A0B4J1Z2 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
IGKV1D-43A0A0B4J1Z2 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC17.46■□□□□ 0.39
IGKV1D-43A0A0B4J1Z2 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
IGKV1D-43A0A0B4J1Z2 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
IGKV1D-43A0A0B4J1Z2 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
IGKV1D-43A0A0B4J1Z2 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
IGKV1D-43A0A0B4J1Z2 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC17.46■□□□□ 0.39
IGKV1D-43A0A0B4J1Z2 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
IGKV1D-43A0A0B4J1Z2 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
IGKV1D-43A0A0B4J1Z2 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
IGKV1D-43A0A0B4J1Z2 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC17.46■□□□□ 0.39
IGKV1D-43A0A0B4J1Z2 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
IGKV1D-43A0A0B4J1Z2 PNMA6B-201ENST00000538162 1200 ntBASIC17.46■□□□□ 0.39
IGKV1D-43A0A0B4J1Z2 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC17.46■□□□□ 0.39
IGKV1D-43A0A0B4J1Z2 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC17.46■□□□□ 0.39
IGKV1D-43A0A0B4J1Z2 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
IGKV1D-43A0A0B4J1Z2 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
IGKV1D-43A0A0B4J1Z2 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.46■□□□□ 0.39
IGKV1D-43A0A0B4J1Z2 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.46■□□□□ 0.39
IGKV1D-43A0A0B4J1Z2 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
IGKV1D-43A0A0B4J1Z2 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
IGKV1D-43A0A0B4J1Z2 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.46■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.45■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.45■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.45■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.45■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC17.45■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.45■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 AC093484.2-201ENST00000580996 2166 ntBASIC17.45■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC17.45■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC17.45■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC17.45■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.45■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC17.45■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC17.45■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 AC060766.5-201ENST00000590539 871 ntBASIC17.45■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC17.45■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC17.45■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.44■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC17.44■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC17.44■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC17.44■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC17.44■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC17.44■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 REXO2-208ENST00000539754 791 ntTSL 2 BASIC17.44■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.44■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC17.44■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
IGKV1D-43A0A0B4J1Z2 TFP1-202ENST00000475455 1573 ntBASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms