Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TRBV5-3A0A0A0MS03 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRBV5-3A0A0A0MS03 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRBV5-3A0A0A0MS03 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRBV5-3A0A0A0MS03 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
TRBV5-3A0A0A0MS03 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TRBV5-3A0A0A0MS03 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.53■□□□□ 0.56
TRBV5-3A0A0A0MS03 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.53■□□□□ 0.56
TRBV5-3A0A0A0MS03 AC010980.2-201ENST00000587099 1412 ntBASIC18.53■□□□□ 0.56
TRBV5-3A0A0A0MS03 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.53■□□□□ 0.56
TRBV5-3A0A0A0MS03 AC069236.1-201ENST00000604339 616 ntBASIC18.53■□□□□ 0.56
TRBV5-3A0A0A0MS03 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.53■□□□□ 0.56
TRBV5-3A0A0A0MS03 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.53■□□□□ 0.56
TRBV5-3A0A0A0MS03 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.53■□□□□ 0.56
TRBV5-3A0A0A0MS03 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.53■□□□□ 0.56
TRBV5-3A0A0A0MS03 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.53■□□□□ 0.56
TRBV5-3A0A0A0MS03 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRBV5-3A0A0A0MS03 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRBV5-3A0A0A0MS03 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRBV5-3A0A0A0MS03 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
TRBV5-3A0A0A0MS03 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.52■□□□□ 0.56
TRBV5-3A0A0A0MS03 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRBV5-3A0A0A0MS03 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRBV5-3A0A0A0MS03 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRBV5-3A0A0A0MS03 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
TRBV5-3A0A0A0MS03 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRBV5-3A0A0A0MS03 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.52■□□□□ 0.56
TRBV5-3A0A0A0MS03 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.52■□□□□ 0.56
TRBV5-3A0A0A0MS03 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TRBV5-3A0A0A0MS03 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
TRBV5-3A0A0A0MS03 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRBV5-3A0A0A0MS03 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.52■□□□□ 0.56
TRBV5-3A0A0A0MS03 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TRBV5-3A0A0A0MS03 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRBV5-3A0A0A0MS03 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC18.52■□□□□ 0.56
TRBV5-3A0A0A0MS03 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.52■□□□□ 0.56
TRBV5-3A0A0A0MS03 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TRBV5-3A0A0A0MS03 AL589743.5-201ENST00000616611 1050 ntBASIC18.52■□□□□ 0.56
TRBV5-3A0A0A0MS03 PARP1-210ENST00000629232 477 ntTSL 5 BASIC18.52■□□□□ 0.56
TRBV5-3A0A0A0MS03 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.52■□□□□ 0.56
TRBV5-3A0A0A0MS03 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.52■□□□□ 0.56
TRBV5-3A0A0A0MS03 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
TRBV5-3A0A0A0MS03 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.52■□□□□ 0.56
TRBV5-3A0A0A0MS03 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TRBV5-3A0A0A0MS03 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TRBV5-3A0A0A0MS03 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRBV5-3A0A0A0MS03 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.52■□□□□ 0.55
TRBV5-3A0A0A0MS03 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
TRBV5-3A0A0A0MS03 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
TRBV5-3A0A0A0MS03 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TRBV5-3A0A0A0MS03 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TRBV5-3A0A0A0MS03 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
TRBV5-3A0A0A0MS03 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
TRBV5-3A0A0A0MS03 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.51■□□□□ 0.55
TRBV5-3A0A0A0MS03 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRBV5-3A0A0A0MS03 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRBV5-3A0A0A0MS03 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRBV5-3A0A0A0MS03 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRBV5-3A0A0A0MS03 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRBV5-3A0A0A0MS03 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRBV5-3A0A0A0MS03 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRBV5-3A0A0A0MS03 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRBV5-3A0A0A0MS03 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRBV5-3A0A0A0MS03 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRBV5-3A0A0A0MS03 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRBV5-3A0A0A0MS03 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.51■□□□□ 0.55
TRBV5-3A0A0A0MS03 KRT17P1-201ENST00000399211 1546 ntBASIC18.51■□□□□ 0.55
TRBV5-3A0A0A0MS03 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.51■□□□□ 0.55
TRBV5-3A0A0A0MS03 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.51■□□□□ 0.55
TRBV5-3A0A0A0MS03 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRBV5-3A0A0A0MS03 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRBV5-3A0A0A0MS03 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRBV5-3A0A0A0MS03 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.51■□□□□ 0.55
TRBV5-3A0A0A0MS03 BID-214ENST00000617586 542 ntTSL 5 BASIC18.51■□□□□ 0.55
TRBV5-3A0A0A0MS03 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.51■□□□□ 0.55
TRBV5-3A0A0A0MS03 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.51■□□□□ 0.55
TRBV5-3A0A0A0MS03 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRBV5-3A0A0A0MS03 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.51■□□□□ 0.55
TRBV5-3A0A0A0MS03 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRBV5-3A0A0A0MS03 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRBV5-3A0A0A0MS03 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.5■□□□□ 0.55
TRBV5-3A0A0A0MS03 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRBV5-3A0A0A0MS03 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRBV5-3A0A0A0MS03 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRBV5-3A0A0A0MS03 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.5■□□□□ 0.55
TRBV5-3A0A0A0MS03 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRBV5-3A0A0A0MS03 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRBV5-3A0A0A0MS03 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.5■□□□□ 0.55
TRBV5-3A0A0A0MS03 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRBV5-3A0A0A0MS03 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRBV5-3A0A0A0MS03 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC18.5■□□□□ 0.55
TRBV5-3A0A0A0MS03 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC18.5■□□□□ 0.55
TRBV5-3A0A0A0MS03 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.5■□□□□ 0.55
TRBV5-3A0A0A0MS03 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.5■□□□□ 0.55
TRBV5-3A0A0A0MS03 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRBV5-3A0A0A0MS03 OR10C1-204ENST00000622521 1039 ntBASIC18.5■□□□□ 0.55
TRBV5-3A0A0A0MS03 AL138781.2-201ENST00000617896 1843 ntBASIC18.5■□□□□ 0.55
TRBV5-3A0A0A0MS03 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRBV5-3A0A0A0MS03 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRBV5-3A0A0A0MS03 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms