Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC187A0A096LP49 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC187A0A096LP49 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC187A0A096LP49 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC187A0A096LP49 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC187A0A096LP49 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CCDC187A0A096LP49 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC187A0A096LP49 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.77■□□□□ 0.6
CCDC187A0A096LP49 ECEL1P2-202ENST00000465689 757 ntBASIC18.77■□□□□ 0.6
CCDC187A0A096LP49 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC18.77■□□□□ 0.6
CCDC187A0A096LP49 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC187A0A096LP49 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC187A0A096LP49 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CCDC187A0A096LP49 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.77■□□□□ 0.59
CCDC187A0A096LP49 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC18.76■□□□□ 0.59
CCDC187A0A096LP49 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC187A0A096LP49 DPP3P2-201ENST00000416030 1696 ntBASIC18.76■□□□□ 0.59
CCDC187A0A096LP49 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.76■□□□□ 0.59
CCDC187A0A096LP49 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC187A0A096LP49 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.76■□□□□ 0.59
CCDC187A0A096LP49 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC187A0A096LP49 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC187A0A096LP49 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC187A0A096LP49 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC187A0A096LP49 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC187A0A096LP49 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC187A0A096LP49 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.76■□□□□ 0.59
CCDC187A0A096LP49 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CCDC187A0A096LP49 LTBR-211ENST00000543190 785 ntTSL 3 BASIC18.76■□□□□ 0.59
CCDC187A0A096LP49 AC006011.2-201ENST00000621313 1158 ntBASIC18.76■□□□□ 0.59
CCDC187A0A096LP49 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC187A0A096LP49 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
CCDC187A0A096LP49 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC187A0A096LP49 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC187A0A096LP49 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC187A0A096LP49 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC187A0A096LP49 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC187A0A096LP49 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC187A0A096LP49 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC187A0A096LP49 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
CCDC187A0A096LP49 WWC2-AS2-201ENST00000578387 2183 ntBASIC18.75■□□□□ 0.59
CCDC187A0A096LP49 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC187A0A096LP49 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC187A0A096LP49 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC187A0A096LP49 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.75■□□□□ 0.59
CCDC187A0A096LP49 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC187A0A096LP49 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC187A0A096LP49 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC187A0A096LP49 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18.75■□□□□ 0.59
CCDC187A0A096LP49 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC187A0A096LP49 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC18.75■□□□□ 0.59
CCDC187A0A096LP49 WWOX-216ENST00000569818 525 ntBASIC18.75■□□□□ 0.59
CCDC187A0A096LP49 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC187A0A096LP49 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC187A0A096LP49 AC018553.1-201ENST00000616682 1458 ntBASIC18.75■□□□□ 0.59
CCDC187A0A096LP49 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
CCDC187A0A096LP49 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC187A0A096LP49 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC187A0A096LP49 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.75■□□□□ 0.59
CCDC187A0A096LP49 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.75■□□□□ 0.59
CCDC187A0A096LP49 AC005229.4-201ENST00000610085 2198 ntBASIC18.75■□□□□ 0.59
CCDC187A0A096LP49 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC187A0A096LP49 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC187A0A096LP49 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC187A0A096LP49 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC187A0A096LP49 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
CCDC187A0A096LP49 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC187A0A096LP49 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC187A0A096LP49 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.74■□□□□ 0.59
CCDC187A0A096LP49 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC18.74■□□□□ 0.59
CCDC187A0A096LP49 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC187A0A096LP49 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC187A0A096LP49 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC187A0A096LP49 PLK5-205ENST00000642079 1969 ntBASIC18.74■□□□□ 0.59
CCDC187A0A096LP49 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.74■□□□□ 0.59
CCDC187A0A096LP49 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC187A0A096LP49 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC187A0A096LP49 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC187A0A096LP49 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC187A0A096LP49 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
CCDC187A0A096LP49 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC187A0A096LP49 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.74■□□□□ 0.59
CCDC187A0A096LP49 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC187A0A096LP49 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.74■□□□□ 0.59
CCDC187A0A096LP49 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.74■□□□□ 0.59
CCDC187A0A096LP49 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
CCDC187A0A096LP49 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.74■□□□□ 0.59
CCDC187A0A096LP49 LINC01238-205ENST00000567549 1107 ntBASIC18.74■□□□□ 0.59
CCDC187A0A096LP49 SLC25A1P4-201ENST00000567977 778 ntBASIC18.74■□□□□ 0.59
CCDC187A0A096LP49 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.74■□□□□ 0.59
CCDC187A0A096LP49 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.74■□□□□ 0.59
CCDC187A0A096LP49 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC187A0A096LP49 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC187A0A096LP49 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC18.74■□□□□ 0.59
CCDC187A0A096LP49 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.74■□□□□ 0.59
CCDC187A0A096LP49 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC187A0A096LP49 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC187A0A096LP49 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC187A0A096LP49 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC187A0A096LP49 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms