Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
NKX2-2O95096 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
NKX2-2O95096 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC5.84□□□□□ -1.47
NKX2-2O95096 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
NKX2-2O95096 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC5.84□□□□□ -1.47
NKX2-2O95096 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.48
NKX2-2O95096 DMD-222ENST00000474231 5209 ntTSL 5 BASIC5.84□□□□□ -1.48
NKX2-2O95096 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC5.84□□□□□ -1.48
NKX2-2O95096 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.48
NKX2-2O95096 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
NKX2-2O95096 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC5.84□□□□□ -1.48
NKX2-2O95096 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC5.84□□□□□ -1.48
NKX2-2O95096 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
NKX2-2O95096 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
NKX2-2O95096 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
NKX2-2O95096 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC5.83□□□□□ -1.48
NKX2-2O95096 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.83□□□□□ -1.48
NKX2-2O95096 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
NKX2-2O95096 MTND4P21-201ENST00000453886 1357 ntBASIC5.83□□□□□ -1.48
NKX2-2O95096 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC5.83□□□□□ -1.48
NKX2-2O95096 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
NKX2-2O95096 AC027279.4-201ENST00000624371 2072 ntBASIC5.83□□□□□ -1.48
NKX2-2O95096 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
NKX2-2O95096 ZNF812P-201ENST00000457674 1694 ntBASIC5.83□□□□□ -1.48
NKX2-2O95096 OR11H13P-201ENST00000359695 979 ntBASIC5.83□□□□□ -1.48
NKX2-2O95096 MIR365B-201ENST00000362317 111 ntBASIC5.83□□□□□ -1.48
NKX2-2O95096 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC5.83□□□□□ -1.48
NKX2-2O95096 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
NKX2-2O95096 AL445238.1-204ENST00000400311 463 ntBASIC5.83□□□□□ -1.48
NKX2-2O95096 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC5.83□□□□□ -1.48
NKX2-2O95096 AL355581.1-201ENST00000415964 830 ntTSL 2 BASIC5.83□□□□□ -1.48
NKX2-2O95096 AL121823.1-201ENST00000418369 741 ntTSL 3 BASIC5.83□□□□□ -1.48
NKX2-2O95096 AC013470.3-201ENST00000420252 1194 ntBASIC5.83□□□□□ -1.48
NKX2-2O95096 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC5.83□□□□□ -1.48
NKX2-2O95096 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC5.83□□□□□ -1.48
NKX2-2O95096 AC012497.1-201ENST00000429392 575 ntBASIC5.83□□□□□ -1.48
NKX2-2O95096 ZFAND6P1-201ENST00000434138 605 ntBASIC5.83□□□□□ -1.48
NKX2-2O95096 SOCS5P1-201ENST00000440415 949 ntBASIC5.83□□□□□ -1.48
NKX2-2O95096 AL356121.1-201ENST00000442911 156 ntBASIC5.83□□□□□ -1.48
NKX2-2O95096 TXNP2-201ENST00000443918 295 ntBASIC5.83□□□□□ -1.48
NKX2-2O95096 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC5.83□□□□□ -1.48
NKX2-2O95096 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
NKX2-2O95096 CTSLP6-201ENST00000458273 1002 ntBASIC5.83□□□□□ -1.48
NKX2-2O95096 AC022336.1-201ENST00000475510 337 ntBASIC5.83□□□□□ -1.48
NKX2-2O95096 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC5.83□□□□□ -1.48
NKX2-2O95096 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC5.83□□□□□ -1.48
NKX2-2O95096 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
NKX2-2O95096 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC5.83□□□□□ -1.48
NKX2-2O95096 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC5.83□□□□□ -1.48
NKX2-2O95096 SNORA74.1-201ENST00000516320 180 ntBASIC5.83□□□□□ -1.48
NKX2-2O95096 RNA5SP400-201ENST00000517155 111 ntBASIC5.83□□□□□ -1.48
NKX2-2O95096 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC5.83□□□□□ -1.48
NKX2-2O95096 OR8K2P-201ENST00000524645 927 ntBASIC5.83□□□□□ -1.48
NKX2-2O95096 GLYAT-203ENST00000529732 1070 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
NKX2-2O95096 FCF1-203ENST00000553615 954 ntTSL 3 BASIC5.83□□□□□ -1.48
NKX2-2O95096 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC5.83□□□□□ -1.48
NKX2-2O95096 AC244034.2-201ENST00000562504 509 ntBASIC5.83□□□□□ -1.48
NKX2-2O95096 OR4H6P-201ENST00000563771 921 ntBASIC5.83□□□□□ -1.48
NKX2-2O95096 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC5.83□□□□□ -1.48
NKX2-2O95096 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC5.83□□□□□ -1.48
NKX2-2O95096 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC5.83□□□□□ -1.48
NKX2-2O95096 AC073111.2-201ENST00000605657 1075 ntBASIC5.83□□□□□ -1.48
NKX2-2O95096 NQO2-209ENST00000606474 470 ntTSL 3 BASIC5.83□□□□□ -1.48
NKX2-2O95096 AL021368.3-201ENST00000607119 578 ntBASIC5.83□□□□□ -1.48
NKX2-2O95096 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC5.83□□□□□ -1.48
NKX2-2O95096 MIR6811-201ENST00000620409 58 ntBASIC5.83□□□□□ -1.48
NKX2-2O95096 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC5.83□□□□□ -1.48
NKX2-2O95096 AC063952.1-203ENST00000634410 658 ntBASIC5.83□□□□□ -1.48
NKX2-2O95096 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
NKX2-2O95096 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
NKX2-2O95096 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
NKX2-2O95096 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC5.83□□□□□ -1.48
NKX2-2O95096 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
NKX2-2O95096 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC5.83□□□□□ -1.48
NKX2-2O95096 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC5.83□□□□□ -1.48
NKX2-2O95096 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
NKX2-2O95096 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
NKX2-2O95096 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
NKX2-2O95096 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
NKX2-2O95096 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
NKX2-2O95096 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
NKX2-2O95096 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
NKX2-2O95096 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
NKX2-2O95096 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
NKX2-2O95096 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
NKX2-2O95096 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
NKX2-2O95096 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
NKX2-2O95096 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC5.83□□□□□ -1.48
NKX2-2O95096 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
NKX2-2O95096 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
NKX2-2O95096 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
NKX2-2O95096 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
NKX2-2O95096 GSTM2-207ENST00000460717 1449 ntTSL 2 BASIC5.82□□□□□ -1.48
NKX2-2O95096 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
NKX2-2O95096 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
NKX2-2O95096 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC5.82□□□□□ -1.48
NKX2-2O95096 OFD1P15Y-201ENST00000411536 1392 ntBASIC5.82□□□□□ -1.48
NKX2-2O95096 OR10AB1P-202ENST00000641219 1686 ntBASIC5.82□□□□□ -1.48
NKX2-2O95096 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
NKX2-2O95096 CASC19-246ENST00000641625 1606 ntBASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms